Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
PCDH7O60245 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PCDH7O60245 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
PCDH7O60245 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDH7O60245 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDH7O60245 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDH7O60245 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.9■□□□□ 0.62
PCDH7O60245 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDH7O60245 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.9■□□□□ 0.62
PCDH7O60245 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDH7O60245 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
PCDH7O60245 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.9■□□□□ 0.62
PCDH7O60245 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.9■□□□□ 0.62
PCDH7O60245 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.9■□□□□ 0.62
PCDH7O60245 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.9■□□□□ 0.62
PCDH7O60245 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDH7O60245 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
PCDH7O60245 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.9■□□□□ 0.62
PCDH7O60245 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDH7O60245 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.9■□□□□ 0.62
PCDH7O60245 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDH7O60245 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDH7O60245 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDH7O60245 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDH7O60245 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.9■□□□□ 0.62
PCDH7O60245 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PCDH7O60245 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
PCDH7O60245 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDH7O60245 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
PCDH7O60245 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
PCDH7O60245 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.89■□□□□ 0.62
PCDH7O60245 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
PCDH7O60245 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH7O60245 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH7O60245 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH7O60245 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH7O60245 TREX1-205ENST00000625293 1783 ntBASIC18.89■□□□□ 0.61
PCDH7O60245 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.89■□□□□ 0.61
PCDH7O60245 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH7O60245 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.89■□□□□ 0.61
PCDH7O60245 AIRN-201ENST00000601203 4374 ntBASIC18.89■□□□□ 0.61
PCDH7O60245 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
PCDH7O60245 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.89■□□□□ 0.61
PCDH7O60245 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.89■□□□□ 0.61
PCDH7O60245 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.89■□□□□ 0.61
PCDH7O60245 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.89■□□□□ 0.61
PCDH7O60245 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
PCDH7O60245 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.89■□□□□ 0.61
PCDH7O60245 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH7O60245 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
PCDH7O60245 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH7O60245 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH7O60245 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.89■□□□□ 0.61
PCDH7O60245 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.89■□□□□ 0.61
PCDH7O60245 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.89■□□□□ 0.61
PCDH7O60245 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.89■□□□□ 0.61
PCDH7O60245 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.89■□□□□ 0.61
PCDH7O60245 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH7O60245 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH7O60245 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDH7O60245 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH7O60245 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
PCDH7O60245 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH7O60245 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH7O60245 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH7O60245 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.88■□□□□ 0.61
PCDH7O60245 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH7O60245 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH7O60245 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH7O60245 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH7O60245 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDH7O60245 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.88■□□□□ 0.61
PCDH7O60245 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH7O60245 SLC29A4P1-201ENST00000398760 971 ntBASIC18.88■□□□□ 0.61
PCDH7O60245 DUSP5P2-201ENST00000426873 1033 ntBASIC18.88■□□□□ 0.61
PCDH7O60245 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
PCDH7O60245 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDH7O60245 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PCDH7O60245 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH7O60245 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH7O60245 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH7O60245 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH7O60245 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH7O60245 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH7O60245 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH7O60245 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PCDH7O60245 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
PCDH7O60245 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH7O60245 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
PCDH7O60245 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
PCDH7O60245 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH7O60245 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH7O60245 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH7O60245 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH7O60245 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH7O60245 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH7O60245 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.87■□□□□ 0.61
PCDH7O60245 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
PCDH7O60245 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH7O60245 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms