Protein–RNA interactions for Protein: O15226

NKRF, NF-kappa-B-repressing factor, humanhuman

Known RBP eCLIP

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKRFO15226 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.842e-8■□□□□ 10
NKRFO15226 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.18■□□□□ 0.822e-8■□□□□ 10
NKRFO15226 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC19.04■□□□□ 0.642e-8■□□□□ 10
NKRFO15226 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.572e-8■□□□□ 10
NKRFO15226 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.532e-8■□□□□ 10
NKRFO15226 TTYH3-205ENST00000429448 756 ntTSL 211.74□□□□□ -0.539e-8■□□□□ 10
NKRFO15226 MIB1-204ENST00000578646 3306 ntTSL 212.27□□□□□ -0.452e-6■□□□□ 10
NKRFO15226 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC19.22■□□□□ 0.677e-7■□□□□ 10
NKRFO15226 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.497e-7■□□□□ 10
NKRFO15226 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.497e-7■□□□□ 10
NKRFO15226 RER1-201ENST00000306256 695 ntTSL 523.94■■□□□ 1.423e-7■□□□□ 10
NKRFO15226 RER1-204ENST00000378518 522 ntTSL 3 BASIC22.89■■□□□ 1.253e-7■□□□□ 10
NKRFO15226 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC19.65■□□□□ 0.743e-7■□□□□ 10
NKRFO15226 RER1-203ENST00000378513 3000 ntTSL 3 BASIC17.4■□□□□ 0.383e-7■□□□□ 10
NKRFO15226 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.363e-7■□□□□ 10
NKRFO15226 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.093e-7■□□□□ 10
NKRFO15226 RER1-205ENST00000443438 540 ntTSL 29.54□□□□□ -0.883e-7■□□□□ 10
NKRFO15226 USP10-208ENST00000563386 590 ntTSL 421.77■■□□□ 1.085e-8■□□□□ 10
NKRFO15226 USP10-205ENST00000562743 888 ntTSL 221.42■■□□□ 1.025e-8■□□□□ 10
NKRFO15226 USP10-216ENST00000569511 571 ntTSL 520.34■□□□□ 0.855e-8■□□□□ 10
NKRFO15226 USP10-203ENST00000562092 254 ntTSL 520.34■□□□□ 0.855e-8■□□□□ 10
NKRFO15226 USP10-210ENST00000563892 570 ntTSL 320.34■□□□□ 0.855e-8■□□□□ 10
NKRFO15226 USP10-211ENST00000564566 561 ntTSL 419.95■□□□□ 0.785e-8■□□□□ 10
NKRFO15226 USP10-204ENST00000562283 569 ntTSL 419.2■□□□□ 0.665e-8■□□□□ 10
NKRFO15226 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.275e-8■□□□□ 10
NKRFO15226 USP10-202ENST00000540269 3070 ntTSL 1 (best)13.97□□□□□ -0.175e-8■□□□□ 10
NKRFO15226 USP10-207ENST00000563048 1315 ntTSL 213.91□□□□□ -0.185e-8■□□□□ 10
NKRFO15226 USP10-215ENST00000569038 730 ntTSL 312.61□□□□□ -0.395e-8■□□□□ 10
NKRFO15226 USP10-219ENST00000570191 2717 ntTSL 2 BASIC12.52□□□□□ -0.415e-8■□□□□ 10
NKRFO15226 USP10-218ENST00000570053 502 ntTSL 35.63□□□□□ -1.515e-8■□□□□ 10
NKRFO15226 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.96■□□□□ 0.957e-7■□□□□ 10
NKRFO15226 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20.7■□□□□ 0.97e-7■□□□□ 10
NKRFO15226 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.817e-7■□□□□ 10
NKRFO15226 PRR5-210ENST00000459857 560 ntTSL 422.83■■□□□ 1.256e-7■□□□□ 10
NKRFO15226 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.134e-6■□□□□ 10
NKRFO15226 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC28.34■■■□□ 2.134e-6■□□□□ 10
NKRFO15226 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.732e-6■□□□□ 10
NKRFO15226 SLC2A4RG-205ENST00000485897 518 ntTSL 525.9■■□□□ 1.742e-8■□□□□ 10
NKRFO15226 EIF5-211ENST00000559532 678 ntTSL 428.92■■■□□ 2.223e-9■□□□□ 10
NKRFO15226 EIF5-209ENST00000559130 583 ntTSL 324.28■■□□□ 1.483e-9■□□□□ 10
NKRFO15226 EIF5-215ENST00000560763 723 ntTSL 221.54■■□□□ 1.043e-9■□□□□ 10
NKRFO15226 EIF5-214ENST00000560338 580 ntTSL 319.95■□□□□ 0.783e-9■□□□□ 10
NKRFO15226 EIF5-210ENST00000559249 704 ntTSL 218.93■□□□□ 0.623e-9■□□□□ 10
NKRFO15226 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.573e-9■□□□□ 10
NKRFO15226 EIF5-203ENST00000558265 872 ntTSL 516.2■□□□□ 0.183e-9■□□□□ 10
NKRFO15226 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.153e-9■□□□□ 10
NKRFO15226 EIF5-216ENST00000560877 521 ntTSL 415.81■□□□□ 0.123e-9■□□□□ 10
NKRFO15226 EIF5-204ENST00000558316 719 ntTSL 315.56■□□□□ 0.083e-9■□□□□ 10
NKRFO15226 EIF5-205ENST00000558506 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.273e-9■□□□□ 10
NKRFO15226 EIF5-213ENST00000560200 776 ntTSL 57.38□□□□□ -1.233e-9■□□□□ 10
NKRFO15226 EIF5-218ENST00000561325 569 ntTSL 45.9□□□□□ -1.463e-9■□□□□ 10
NKRFO15226 SUZ12P1-204ENST00000579526 563 ntTSL 225■■□□□ 1.592e-6■□□□□ 9.9
NKRFO15226 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC24.96■■□□□ 1.592e-6■□□□□ 9.9
NKRFO15226 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC20.21■□□□□ 0.832e-9■□□□□ 9.9
NKRFO15226 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.062e-9■□□□□ 9.9
NKRFO15226 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.312e-7■□□□□ 9.9
NKRFO15226 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC22.7■■□□□ 1.222e-7■□□□□ 9.9
NKRFO15226 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC21.77■■□□□ 1.082e-7■□□□□ 9.9
NKRFO15226 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.632e-7■□□□□ 9.9
NKRFO15226 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.525e-8■□□□□ 9.9
NKRFO15226 KTN1-215ENST00000554567 730 ntTSL 531.13■■■□□ 2.573e-6■□□□□ 9.9
NKRFO15226 KTN1-221ENST00000555498 595 ntAPPRIS ALT2 TSL 323.48■■□□□ 1.353e-6■□□□□ 9.9
NKRFO15226 KTN1-225ENST00000557267 291 ntTSL 36.3□□□□□ -1.43e-6■□□□□ 9.9
NKRFO15226 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.493e-6■□□□□ 9.9
NKRFO15226 KTN1-208ENST00000459737 4793 ntTSL 1 (best)3.02□□□□□ -1.933e-6■□□□□ 9.9
NKRFO15226 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.993e-6■□□□□ 9.9
NKRFO15226 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.68□□□□□ -2.143e-6■□□□□ 9.9
NKRFO15226 AXIN2-207ENST00000585045 1034 ntTSL 223.54■■□□□ 1.363e-8■□□□□ 9.9
NKRFO15226 AXIN2-203ENST00000544103 621 ntTSL 318.96■□□□□ 0.633e-8■□□□□ 9.9
NKRFO15226 MGAT4B-217ENST00000521305 1213 ntTSL 521.43■■□□□ 1.027e-10■□□□□ 9.9
NKRFO15226 GOLGA3-204ENST00000534967 484 ntTSL 331.03■■■□□ 2.564e-11■□□□□ 9.9
NKRFO15226 GOLGA3-205ENST00000537317 298 ntTSL 317.53■□□□□ 0.44e-11■□□□□ 9.9
NKRFO15226 CHFR-219ENST00000541341 581 ntTSL 311□□□□□ -0.654e-11■□□□□ 9.9
NKRFO15226 TMEM132A-207ENST00000537065 324 ntTSL 330.75■■■□□ 2.514e-6■□□□□ 9.9
NKRFO15226 TMEM132A-211ENST00000540276 514 ntTSL 329.29■■■□□ 2.284e-6■□□□□ 9.9
NKRFO15226 DCUN1D4-211ENST00000506673 548 ntTSL 429.19■■■□□ 2.264e-6■□□□□ 9.9
NKRFO15226 DCUN1D4-220ENST00000511675 643 ntTSL 229.19■■■□□ 2.264e-6■□□□□ 9.9
NKRFO15226 DCUN1D4-222ENST00000513800 949 ntTSL 229.19■■■□□ 2.264e-6■□□□□ 9.9
NKRFO15226 DCUN1D4-205ENST00000502930 548 ntTSL 428.29■■■□□ 2.124e-6■□□□□ 9.9
NKRFO15226 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC27.76■■■□□ 2.032e-10■□□□□ 9.9
NKRFO15226 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC27.4■■□□□ 1.982e-10■□□□□ 9.9
NKRFO15226 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC26.71■■□□□ 1.872e-10■□□□□ 9.9
NKRFO15226 TMEM132A-212ENST00000543732 742 ntTSL 326.42■■□□□ 1.824e-6■□□□□ 9.9
NKRFO15226 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC26.41■■□□□ 1.822e-10■□□□□ 9.9
NKRFO15226 TMEM132A-213ENST00000544065 990 ntTSL 225.87■■□□□ 1.734e-6■□□□□ 9.9
NKRFO15226 DCUN1D4-213ENST00000507741 1584 ntTSL 225.52■■□□□ 1.684e-6■□□□□ 9.9
NKRFO15226 DCUN1D4-206ENST00000504113 594 ntTSL 425.45■■□□□ 1.664e-6■□□□□ 9.9
NKRFO15226 DCUN1D4-215ENST00000509068 805 ntTSL 325.37■■□□□ 1.654e-6■□□□□ 9.9
NKRFO15226 SLC26A11-217ENST00000577155 762 ntTSL 525.35■■□□□ 1.654e-6■□□□□ 9.9
NKRFO15226 TMEM56-203ENST00000456991 992 ntTSL 325.24■■□□□ 1.634e-6■□□□□ 9.9
NKRFO15226 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC24.59■■□□□ 1.534e-6■□□□□ 9.9
NKRFO15226 CALM2-207ENST00000484408 682 ntTSL 523.41■■□□□ 1.342e-10■□□□□ 9.9
NKRFO15226 SETD3-203ENST00000357563 2191 ntTSL 523.38■■□□□ 1.334e-6■□□□□ 9.9
NKRFO15226 OTUD5-205ENST00000455452 2077 ntTSL 523.08■■□□□ 1.292e-10■□□□□ 9.9
NKRFO15226 DCUN1D4-216ENST00000509376 2293 ntTSL 222.93■■□□□ 1.264e-6■□□□□ 9.9
NKRFO15226 TNRC18-204ENST00000413081 925 ntTSL 322.18■■□□□ 1.144e-6■□□□□ 9.9
NKRFO15226 SETD3-206ENST00000453764 973 ntTSL 522.15■■□□□ 1.144e-6■□□□□ 9.9
NKRFO15226 SLC26A11-207ENST00000571564 714 ntTSL 522.15■■□□□ 1.144e-6■□□□□ 9.9
NKRFO15226 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.14e-6■□□□□ 9.9
NKRFO15226 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.12e-10■□□□□ 9.9
Retrieved 100 of 9,198 protein–RNA pairs in 64.1 ms