RNA–Protein interactions for RNA: ENST00000443438.5

RER1-205, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 540 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-205ENST00000443438 NISCHQ9Y2I1 1504 aa19.28■□□□□ 0.68
RER1-205ENST00000443438 CCDC180Q9P1Z9 1646 aa16.7■□□□□ 0.26
RER1-205ENST00000443438 AEBP2Q6ZN18 517 aaPredicted RBP16.56■□□□□ 0.24
RER1-205ENST00000443438 CHIC1Q5VXU3 224 aa16.33■□□□□ 0.2
RER1-205ENST00000443438 ZCCHC6Q5VYS8 1495 aaKnown RBP16.22■□□□□ 0.19
RER1-205ENST00000443438 DCAF1Q9Y4B6 1507 aa15.95■□□□□ 0.14
RER1-205ENST00000443438 DCAF8L2P0C7V8 631 aa15.8■□□□□ 0.12
RER1-205ENST00000443438 SHROOM4Q9ULL8 1493 aa15.78■□□□□ 0.12
RER1-205ENST00000443438 ABCC9O60706 1549 aa15.71■□□□□ 0.11
RER1-205ENST00000443438 MYO15BQ96JP2 1530 aa15.71■□□□□ 0.11
RER1-205ENST00000443438 NACADO15069 1562 aa15.54■□□□□ 0.08
RER1-205ENST00000443438 SCRIBQ14160 1630 aa15.38■□□□□ 0.05
RER1-205ENST00000443438 RB1CC1Q8TDY2 1594 aa15.36■□□□□ 0.05
RER1-205ENST00000443438 DNAJC5BQ9UF47 199 aa15.24■□□□□ 0.03
RER1-205ENST00000443438 SUPT5HO00267 1087 aaKnown RBP15.23■□□□□ 0.03
RER1-205ENST00000443438 UNC13AQ9UPW8 1703 aa15.05■□□□□ -0
RER1-205ENST00000443438 RSF1Q96T23 1441 aaPredicted RBP15.03■□□□□ -0
RER1-205ENST00000443438 CECR2Q9BXF3 1484 aa15□□□□□ -0.01
RER1-205ENST00000443438 BICRAQ9NZM4 1560 aa14.98□□□□□ -0.01
RER1-205ENST00000443438 MROH2BQ7Z745 1585 aa14.91□□□□□ -0.02
RER1-205ENST00000443438 PABPN1Q86U42 306 aaKnown RBP eCLIP14.86□□□□□ -0.03
RER1-205ENST00000443438 DNAJC5Q9H3Z4 198 aa14.86□□□□□ -0.03
RER1-205ENST00000443438 BAZ1AQ9NRL2 1556 aaPredicted RBP14.84□□□□□ -0.03
RER1-205ENST00000443438 SMARCA4P51532 1647 aa14.77□□□□□ -0.05
RER1-205ENST00000443438 WIZO95785 1651 aa14.76□□□□□ -0.05
RER1-205ENST00000443438 TOP2AP11388 1531 aaKnown RBP14.62□□□□□ -0.07
RER1-205ENST00000443438 PEG3Q9GZU2 1588 aa14.61□□□□□ -0.07
RER1-205ENST00000443438 ATAD2BQ9ULI0 1458 aa14.53□□□□□ -0.08
RER1-205ENST00000443438 SMARCA2P51531 1590 aa14.51□□□□□ -0.09
RER1-205ENST00000443438 CCDC88BA6NC98 1476 aa14.5□□□□□ -0.09
RER1-205ENST00000443438 EIF4G1Q04637 1599 aaKnown RBP14.47□□□□□ -0.09
RER1-205ENST00000443438 PHF23Q9BUL5 403 aaPredicted RBP14.42□□□□□ -0.1
RER1-205ENST00000443438 BAZ1BQ9UIG0 1483 aaKnown RBP14.4□□□□□ -0.1
RER1-205ENST00000443438 NCAPD3P42695 1498 aa14.39□□□□□ -0.11
RER1-205ENST00000443438 HMGXB3Q12766 1538 aa14.34□□□□□ -0.11
RER1-205ENST00000443438 TRIM41Q8WV44 630 aa14.31□□□□□ -0.12
RER1-205ENST00000443438 CC2D2AQ9P2K1 1620 aa14.22□□□□□ -0.13
RER1-205ENST00000443438 ABCC8Q09428 1581 aa14.2□□□□□ -0.14
RER1-205ENST00000443438 LOC105371045A0A1W2PR82 267 aa14.14□□□□□ -0.15
RER1-205ENST00000443438 CFTRP13569 1480 aa14.1□□□□□ -0.15
RER1-205ENST00000443438 WRNQ14191 1432 aaPredicted RBP eCLIP14.09□□□□□ -0.154e-8■■■■■ 27.9
RER1-205ENST00000443438 SYNJ1O43426 1573 aa14.05□□□□□ -0.16
RER1-205ENST00000443438 FAM9AQ8IZU1 332 aaPredicted RBP14.05□□□□□ -0.16
RER1-205ENST00000443438 CADPSQ9ULU8 1353 aa14.02□□□□□ -0.17
RER1-205ENST00000443438 SOGA1O94964 1423 aa13.99□□□□□ -0.17
RER1-205ENST00000443438 SENP3Q9H4L4 574 aaPredicted RBP13.97□□□□□ -0.17
RER1-205ENST00000443438 TOP2BQ02880 1626 aa13.97□□□□□ -0.17
RER1-205ENST00000443438 RUSC2Q8N2Y8 1516 aa13.95□□□□□ -0.18
RER1-205ENST00000443438 BIVM-ERCC5R4GMW8 1640 aa13.94□□□□□ -0.18
RER1-205ENST00000443438 EEA1Q15075 1411 aa13.94□□□□□ -0.18
RER1-205ENST00000443438 PRDM2Q13029 1718 aa13.93□□□□□ -0.18
RER1-205ENST00000443438 CUX1P39880 1505 aa13.93□□□□□ -0.18
RER1-205ENST00000443438 CSRNP3Q8WYN3 585 aa13.89□□□□□ -0.19
RER1-205ENST00000443438 NESP48681 1621 aa13.86□□□□□ -0.19
RER1-205ENST00000443438 FANCD2Q9BXW9 1451 aa13.84□□□□□ -0.19
RER1-205ENST00000443438 EHMT2Q96KQ7 1210 aa13.82□□□□□ -0.2
RER1-205ENST00000443438 LAMC3Q9Y6N6 1575 aa13.82□□□□□ -0.2
RER1-205ENST00000443438 TNIKQ9UKE5 1360 aa13.78□□□□□ -0.2
RER1-205ENST00000443438 KIF21BO75037 1637 aa13.76□□□□□ -0.21
RER1-205ENST00000443438 GOLGA3Q08378 1498 aa13.75□□□□□ -0.21
RER1-205ENST00000443438 FGD5Q6ZNL6 1462 aa13.74□□□□□ -0.21
RER1-205ENST00000443438 CEP164Q9UPV0 1460 aa13.74□□□□□ -0.21
RER1-205ENST00000443438 DNMBPQ6XZF7 1577 aa13.73□□□□□ -0.21
RER1-205ENST00000443438 TOPBP1Q92547 1522 aa13.72□□□□□ -0.21
RER1-205ENST00000443438 KIF27Q86VH2 1401 aa13.72□□□□□ -0.21
RER1-205ENST00000443438 PDS5BQ9NTI5 1447 aa13.72□□□□□ -0.21
RER1-205ENST00000443438 PRXQ9BXM0 1461 aa13.71□□□□□ -0.21
RER1-205ENST00000443438 URB2Q14146 1524 aaKnown RBP13.69□□□□□ -0.22
RER1-205ENST00000443438 RAPGEF2Q9Y4G8 1499 aa13.69□□□□□ -0.22
RER1-205ENST00000443438 CEP162Q5TB80 1403 aa13.68□□□□□ -0.22
RER1-205ENST00000443438 UBTFP17480 764 aaKnown RBP13.66□□□□□ -0.22
RER1-205ENST00000443438 CUX2O14529 1486 aa13.66□□□□□ -0.22
RER1-205ENST00000443438 POLA1P09884 1462 aaPredicted RBP13.66□□□□□ -0.22
RER1-205ENST00000443438 ERICH3Q5RHP9 1530 aa13.65□□□□□ -0.22
RER1-205ENST00000443438 IGF1RP08069 1367 aa13.65□□□□□ -0.22
RER1-205ENST00000443438 KIF21AQ7Z4S6 1674 aa13.63□□□□□ -0.23
RER1-205ENST00000443438 RAD54L2Q9Y4B4 1467 aa13.63□□□□□ -0.23
RER1-205ENST00000443438 ABCA10Q8WWZ4 1543 aa13.63□□□□□ -0.23
RER1-205ENST00000443438 PCGF6Q9BYE7 350 aa13.56□□□□□ -0.24
RER1-205ENST00000443438 MRC2Q9UBG0 1479 aa13.55□□□□□ -0.24
RER1-205ENST00000443438 WDR97A6NE52 1622 aa13.55□□□□□ -0.24
RER1-205ENST00000443438 TRIM26Q12899 539 aaPredicted RBP13.55□□□□□ -0.24
RER1-205ENST00000443438 CARMIL1Q5VZK9 1371 aa13.54□□□□□ -0.24
RER1-205ENST00000443438 CLIP1P30622 1438 aa13.54□□□□□ -0.24
RER1-205ENST00000443438 TARBP1Q13395 1621 aaKnown RBP13.51□□□□□ -0.25
RER1-205ENST00000443438 ABCA5Q8WWZ7 1642 aa13.5□□□□□ -0.25
RER1-205ENST00000443438 WDR62O43379 1518 aa13.49□□□□□ -0.25
RER1-205ENST00000443438 TDRD9Q8NDG6 1382 aaKnown RBP13.47□□□□□ -0.25
RER1-205ENST00000443438 GAPVD1Q14C86 1478 aa13.45□□□□□ -0.26
RER1-205ENST00000443438 VPS8Q8N3P4 1428 aa13.45□□□□□ -0.26
RER1-205ENST00000443438 ARAP1Q96P48 1450 aa13.44□□□□□ -0.26
RER1-205ENST00000443438 CUL7Q14999 1698 aa13.44□□□□□ -0.26
RER1-205ENST00000443438 PPARGC1BQ86YN6 1023 aaKnown RBP13.43□□□□□ -0.26
RER1-205ENST00000443438 THOC2Q8NI27 1593 aaKnown RBP13.41□□□□□ -0.26
RER1-205ENST00000443438 IFT140Q96RY7 1462 aa13.41□□□□□ -0.26
RER1-205ENST00000443438 ARHGAP35Q9NRY4 1499 aa13.41□□□□□ -0.26
RER1-205ENST00000443438 ERCC6Q03468 1493 aa13.4□□□□□ -0.26
RER1-205ENST00000443438 RANGAP1P46060 587 aaPredicted RBP13.39□□□□□ -0.27
RER1-205ENST00000443438 AQRO60306 1485 aaKnown RBP eCLIP13.37□□□□□ -0.27
RER1-205ENST00000443438 ZNF608Q9ULD9 1512 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms