Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MEIS3P1A6NDR6 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
MEIS3P1A6NDR6 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
MEIS3P1A6NDR6 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
MEIS3P1A6NDR6 TP73-202ENST00000354437 2140 ntTSL 5 BASIC16.96■□□□□ 0.3
MEIS3P1A6NDR6 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
MEIS3P1A6NDR6 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
MEIS3P1A6NDR6 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC16.96■□□□□ 0.3
MEIS3P1A6NDR6 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MEIS3P1A6NDR6 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
MEIS3P1A6NDR6 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.95■□□□□ 0.3
MEIS3P1A6NDR6 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
MEIS3P1A6NDR6 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MEIS3P1A6NDR6 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
MEIS3P1A6NDR6 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MEIS3P1A6NDR6 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
MEIS3P1A6NDR6 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC16.95■□□□□ 0.3
MEIS3P1A6NDR6 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
MEIS3P1A6NDR6 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MEIS3P1A6NDR6 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC16.95■□□□□ 0.3
MEIS3P1A6NDR6 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC16.95■□□□□ 0.3
MEIS3P1A6NDR6 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MEIS3P1A6NDR6 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC16.95■□□□□ 0.3
MEIS3P1A6NDR6 SLC7A5P2-201ENST00000553010 536 ntBASIC16.95■□□□□ 0.3
MEIS3P1A6NDR6 AC012414.1-201ENST00000556676 535 ntBASIC16.95■□□□□ 0.3
MEIS3P1A6NDR6 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC16.95■□□□□ 0.3
MEIS3P1A6NDR6 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
MEIS3P1A6NDR6 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MEIS3P1A6NDR6 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC16.95■□□□□ 0.3
MEIS3P1A6NDR6 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MEIS3P1A6NDR6 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.95■□□□□ 0.3
MEIS3P1A6NDR6 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.95■□□□□ 0.3
MEIS3P1A6NDR6 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
MEIS3P1A6NDR6 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
MEIS3P1A6NDR6 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MEIS3P1A6NDR6 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
MEIS3P1A6NDR6 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
MEIS3P1A6NDR6 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
MEIS3P1A6NDR6 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.95■□□□□ 0.3
MEIS3P1A6NDR6 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MEIS3P1A6NDR6 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC16.94■□□□□ 0.3
MEIS3P1A6NDR6 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MEIS3P1A6NDR6 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MEIS3P1A6NDR6 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC16.94■□□□□ 0.3
MEIS3P1A6NDR6 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MEIS3P1A6NDR6 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
MEIS3P1A6NDR6 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
MEIS3P1A6NDR6 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC16.94■□□□□ 0.3
MEIS3P1A6NDR6 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
MEIS3P1A6NDR6 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MEIS3P1A6NDR6 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
MEIS3P1A6NDR6 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
MEIS3P1A6NDR6 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
MEIS3P1A6NDR6 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MEIS3P1A6NDR6 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
MEIS3P1A6NDR6 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC16.94■□□□□ 0.3
MEIS3P1A6NDR6 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC16.94■□□□□ 0.3
MEIS3P1A6NDR6 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.94■□□□□ 0.3
MEIS3P1A6NDR6 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC16.94■□□□□ 0.3
MEIS3P1A6NDR6 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
MEIS3P1A6NDR6 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
MEIS3P1A6NDR6 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MEIS3P1A6NDR6 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
MEIS3P1A6NDR6 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC16.93■□□□□ 0.3
MEIS3P1A6NDR6 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MEIS3P1A6NDR6 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.93■□□□□ 0.3
MEIS3P1A6NDR6 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
MEIS3P1A6NDR6 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MEIS3P1A6NDR6 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MEIS3P1A6NDR6 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
MEIS3P1A6NDR6 AP001330.3-201ENST00000520123 633 ntBASIC16.93■□□□□ 0.3
MEIS3P1A6NDR6 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC16.93■□□□□ 0.3
MEIS3P1A6NDR6 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC16.93■□□□□ 0.3
MEIS3P1A6NDR6 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MEIS3P1A6NDR6 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.93■□□□□ 0.3
MEIS3P1A6NDR6 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
MEIS3P1A6NDR6 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MEIS3P1A6NDR6 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
MEIS3P1A6NDR6 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MEIS3P1A6NDR6 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MEIS3P1A6NDR6 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.92■□□□□ 0.3
MEIS3P1A6NDR6 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MEIS3P1A6NDR6 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
MEIS3P1A6NDR6 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MEIS3P1A6NDR6 STK25-205ENST00000405883 1904 ntTSL 2 BASIC16.92■□□□□ 0.3
MEIS3P1A6NDR6 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
MEIS3P1A6NDR6 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MEIS3P1A6NDR6 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MEIS3P1A6NDR6 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.92■□□□□ 0.3
MEIS3P1A6NDR6 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
MEIS3P1A6NDR6 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.92■□□□□ 0.3
MEIS3P1A6NDR6 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MEIS3P1A6NDR6 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MEIS3P1A6NDR6 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
MEIS3P1A6NDR6 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MEIS3P1A6NDR6 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MEIS3P1A6NDR6 PBX2P1-201ENST00000493219 1291 ntBASIC16.92■□□□□ 0.3
MEIS3P1A6NDR6 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC16.92■□□□□ 0.3
MEIS3P1A6NDR6 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC16.92■□□□□ 0.3
MEIS3P1A6NDR6 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms