Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
HIPK4Q8NE63 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19.23■□□□□ 0.67
HIPK4Q8NE63 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
HIPK4Q8NE63 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HIPK4Q8NE63 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HIPK4Q8NE63 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.23■□□□□ 0.67
HIPK4Q8NE63 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
HIPK4Q8NE63 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HIPK4Q8NE63 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HIPK4Q8NE63 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
HIPK4Q8NE63 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HIPK4Q8NE63 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HIPK4Q8NE63 KRT87P-202ENST00000534226 1464 ntBASIC19.22■□□□□ 0.67
HIPK4Q8NE63 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.22■□□□□ 0.67
HIPK4Q8NE63 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
HIPK4Q8NE63 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HIPK4Q8NE63 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HIPK4Q8NE63 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.22■□□□□ 0.67
HIPK4Q8NE63 AC079140.4-201ENST00000507448 529 ntBASIC19.22■□□□□ 0.67
HIPK4Q8NE63 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.22■□□□□ 0.67
HIPK4Q8NE63 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HIPK4Q8NE63 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HIPK4Q8NE63 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HIPK4Q8NE63 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HIPK4Q8NE63 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HIPK4Q8NE63 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HIPK4Q8NE63 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HIPK4Q8NE63 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HIPK4Q8NE63 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HIPK4Q8NE63 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HIPK4Q8NE63 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HIPK4Q8NE63 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HIPK4Q8NE63 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HIPK4Q8NE63 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.21■□□□□ 0.67
HIPK4Q8NE63 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.21■□□□□ 0.67
HIPK4Q8NE63 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HIPK4Q8NE63 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.21■□□□□ 0.67
HIPK4Q8NE63 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.21■□□□□ 0.67
HIPK4Q8NE63 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HIPK4Q8NE63 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HIPK4Q8NE63 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.21■□□□□ 0.67
HIPK4Q8NE63 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
HIPK4Q8NE63 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
HIPK4Q8NE63 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
HIPK4Q8NE63 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.21■□□□□ 0.67
HIPK4Q8NE63 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HIPK4Q8NE63 TREX1-205ENST00000625293 1783 ntBASIC19.21■□□□□ 0.67
HIPK4Q8NE63 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
HIPK4Q8NE63 TMEM179-206ENST00000616017 1645 ntBASIC19.21■□□□□ 0.67
HIPK4Q8NE63 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
HIPK4Q8NE63 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HIPK4Q8NE63 AC005082.1-201ENST00000413042 2259 ntBASIC19.21■□□□□ 0.67
HIPK4Q8NE63 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
HIPK4Q8NE63 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HIPK4Q8NE63 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.2■□□□□ 0.66
HIPK4Q8NE63 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HIPK4Q8NE63 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.2■□□□□ 0.66
HIPK4Q8NE63 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HIPK4Q8NE63 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HIPK4Q8NE63 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HIPK4Q8NE63 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HIPK4Q8NE63 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HIPK4Q8NE63 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.2■□□□□ 0.66
HIPK4Q8NE63 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HIPK4Q8NE63 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.2■□□□□ 0.66
HIPK4Q8NE63 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.2■□□□□ 0.66
HIPK4Q8NE63 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HIPK4Q8NE63 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
HIPK4Q8NE63 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HIPK4Q8NE63 AC005332.8-201ENST00000622750 2735 ntBASIC19.2■□□□□ 0.66
HIPK4Q8NE63 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
HIPK4Q8NE63 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HIPK4Q8NE63 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.2■□□□□ 0.66
HIPK4Q8NE63 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HIPK4Q8NE63 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
HIPK4Q8NE63 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HIPK4Q8NE63 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.19■□□□□ 0.66
HIPK4Q8NE63 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HIPK4Q8NE63 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
HIPK4Q8NE63 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
HIPK4Q8NE63 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.19■□□□□ 0.66
HIPK4Q8NE63 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.19■□□□□ 0.66
HIPK4Q8NE63 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HIPK4Q8NE63 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.19■□□□□ 0.66
HIPK4Q8NE63 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HIPK4Q8NE63 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HIPK4Q8NE63 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.19■□□□□ 0.66
HIPK4Q8NE63 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HIPK4Q8NE63 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.19■□□□□ 0.66
HIPK4Q8NE63 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HIPK4Q8NE63 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HIPK4Q8NE63 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HIPK4Q8NE63 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HIPK4Q8NE63 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.19■□□□□ 0.66
HIPK4Q8NE63 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
HIPK4Q8NE63 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HIPK4Q8NE63 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
HIPK4Q8NE63 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HIPK4Q8NE63 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HIPK4Q8NE63 KRT16P2-201ENST00000414673 1423 ntBASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms