Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
CNTNAP1P78357 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC23.78■■□□□ 1.4
CNTNAP1P78357 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CNTNAP1P78357 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CNTNAP1P78357 PVRIG2P-201ENST00000435460 978 ntBASIC23.78■■□□□ 1.4
CNTNAP1P78357 AP005242.2-201ENST00000580065 1175 ntBASIC23.78■■□□□ 1.4
CNTNAP1P78357 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CNTNAP1P78357 AL121603.2-201ENST00000557373 2117 ntBASIC23.77■■□□□ 1.4
CNTNAP1P78357 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
CNTNAP1P78357 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
CNTNAP1P78357 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CNTNAP1P78357 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CNTNAP1P78357 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CNTNAP1P78357 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CNTNAP1P78357 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC23.77■■□□□ 1.4
CNTNAP1P78357 AC246785.2-201ENST00000432512 513 ntBASIC23.77■■□□□ 1.4
CNTNAP1P78357 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC23.77■■□□□ 1.4
CNTNAP1P78357 AC139887.4-201ENST00000607877 719 ntBASIC23.77■■□□□ 1.4
CNTNAP1P78357 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC23.77■■□□□ 1.4
CNTNAP1P78357 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.39
CNTNAP1P78357 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
CNTNAP1P78357 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
CNTNAP1P78357 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
CNTNAP1P78357 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC23.76■■□□□ 1.39
CNTNAP1P78357 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CNTNAP1P78357 H19-201ENST00000411754 1788 ntTSL 5 BASIC23.76■■□□□ 1.39
CNTNAP1P78357 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CNTNAP1P78357 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CNTNAP1P78357 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CNTNAP1P78357 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CNTNAP1P78357 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC23.76■■□□□ 1.39
CNTNAP1P78357 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CNTNAP1P78357 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC23.76■■□□□ 1.39
CNTNAP1P78357 AP000347.1-202ENST00000435868 847 ntBASIC23.76■■□□□ 1.39
CNTNAP1P78357 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CNTNAP1P78357 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC23.76■■□□□ 1.39
CNTNAP1P78357 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC23.76■■□□□ 1.39
CNTNAP1P78357 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC23.76■■□□□ 1.39
CNTNAP1P78357 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC23.76■■□□□ 1.39
CNTNAP1P78357 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC23.76■■□□□ 1.39
CNTNAP1P78357 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CNTNAP1P78357 EP400NL-214ENST00000641289 2402 ntBASIC23.75■■□□□ 1.39
CNTNAP1P78357 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC23.75■■□□□ 1.39
CNTNAP1P78357 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
CNTNAP1P78357 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
CNTNAP1P78357 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
CNTNAP1P78357 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC23.75■■□□□ 1.39
CNTNAP1P78357 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC23.75■■□□□ 1.39
CNTNAP1P78357 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CNTNAP1P78357 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CNTNAP1P78357 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
CNTNAP1P78357 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC23.75■■□□□ 1.39
CNTNAP1P78357 PRR31-201ENST00000371629 978 ntTSL 2 BASIC23.75■■□□□ 1.39
CNTNAP1P78357 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CNTNAP1P78357 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC23.75■■□□□ 1.39
CNTNAP1P78357 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CNTNAP1P78357 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC23.75■■□□□ 1.39
CNTNAP1P78357 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC23.75■■□□□ 1.39
CNTNAP1P78357 GRAMD4P8-201ENST00000605465 1115 ntBASIC23.75■■□□□ 1.39
CNTNAP1P78357 AC023511.2-201ENST00000618803 211 ntBASIC23.75■■□□□ 1.39
CNTNAP1P78357 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC23.75■■□□□ 1.39
CNTNAP1P78357 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
CNTNAP1P78357 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.74■■□□□ 1.39
CNTNAP1P78357 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CNTNAP1P78357 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC23.74■■□□□ 1.39
CNTNAP1P78357 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC23.74■■□□□ 1.39
CNTNAP1P78357 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
CNTNAP1P78357 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CNTNAP1P78357 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CNTNAP1P78357 AP000593.1-201ENST00000393668 712 ntBASIC23.74■■□□□ 1.39
CNTNAP1P78357 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC23.74■■□□□ 1.39
CNTNAP1P78357 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC23.74■■□□□ 1.39
CNTNAP1P78357 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CNTNAP1P78357 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
CNTNAP1P78357 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CNTNAP1P78357 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CNTNAP1P78357 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CNTNAP1P78357 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CNTNAP1P78357 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CNTNAP1P78357 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
CNTNAP1P78357 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CNTNAP1P78357 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CNTNAP1P78357 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
CNTNAP1P78357 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
CNTNAP1P78357 HLA-G-202ENST00000376815 851 ntBASIC23.73■■□□□ 1.39
CNTNAP1P78357 HLA-G-203ENST00000376818 1127 ntBASIC23.73■■□□□ 1.39
CNTNAP1P78357 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC23.73■■□□□ 1.39
CNTNAP1P78357 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CNTNAP1P78357 AC092647.4-201ENST00000457211 535 ntBASIC23.73■■□□□ 1.39
CNTNAP1P78357 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC23.73■■□□□ 1.39
CNTNAP1P78357 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC23.73■■□□□ 1.39
CNTNAP1P78357 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CNTNAP1P78357 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC23.73■■□□□ 1.39
CNTNAP1P78357 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CNTNAP1P78357 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
CNTNAP1P78357 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CNTNAP1P78357 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CNTNAP1P78357 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
CNTNAP1P78357 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CNTNAP1P78357 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms