Protein–RNA interactions for Protein: P47895

ALDH1A3, Aldehyde dehydrogenase family 1 member A3, humanhuman

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A3P47895 REXO1L12P-201ENST00000622156 912 ntBASIC21■□□□□ 0.95
ALDH1A3P47895 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21■□□□□ 0.95
ALDH1A3P47895 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC21■□□□□ 0.95
ALDH1A3P47895 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
ALDH1A3P47895 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
ALDH1A3P47895 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21■□□□□ 0.95
ALDH1A3P47895 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21■□□□□ 0.95
ALDH1A3P47895 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ALDH1A3P47895 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ALDH1A3P47895 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ALDH1A3P47895 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.99■□□□□ 0.95
ALDH1A3P47895 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ALDH1A3P47895 DPP3P2-201ENST00000416030 1696 ntBASIC20.99■□□□□ 0.95
ALDH1A3P47895 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ALDH1A3P47895 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
ALDH1A3P47895 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ALDH1A3P47895 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ALDH1A3P47895 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ALDH1A3P47895 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ALDH1A3P47895 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
ALDH1A3P47895 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
ALDH1A3P47895 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ALDH1A3P47895 AL353807.1-201ENST00000427475 662 ntBASIC20.99■□□□□ 0.95
ALDH1A3P47895 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.99■□□□□ 0.95
ALDH1A3P47895 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.99■□□□□ 0.95
ALDH1A3P47895 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.99■□□□□ 0.95
ALDH1A3P47895 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.99■□□□□ 0.95
ALDH1A3P47895 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
ALDH1A3P47895 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ALDH1A3P47895 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ALDH1A3P47895 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.99■□□□□ 0.95
ALDH1A3P47895 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ALDH1A3P47895 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ALDH1A3P47895 AC092667.1-201ENST00000434301 2586 ntBASIC20.98■□□□□ 0.95
ALDH1A3P47895 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.98■□□□□ 0.95
ALDH1A3P47895 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.98■□□□□ 0.95
ALDH1A3P47895 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ALDH1A3P47895 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.98■□□□□ 0.95
ALDH1A3P47895 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
ALDH1A3P47895 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
ALDH1A3P47895 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.98■□□□□ 0.95
ALDH1A3P47895 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.98■□□□□ 0.95
ALDH1A3P47895 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.98■□□□□ 0.95
ALDH1A3P47895 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ALDH1A3P47895 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ALDH1A3P47895 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
ALDH1A3P47895 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ALDH1A3P47895 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
ALDH1A3P47895 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.98■□□□□ 0.95
ALDH1A3P47895 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.98■□□□□ 0.95
ALDH1A3P47895 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
ALDH1A3P47895 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
ALDH1A3P47895 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ALDH1A3P47895 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ALDH1A3P47895 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ALDH1A3P47895 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.97■□□□□ 0.95
ALDH1A3P47895 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ALDH1A3P47895 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
ALDH1A3P47895 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ALDH1A3P47895 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ALDH1A3P47895 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.97■□□□□ 0.95
ALDH1A3P47895 AF186192.3-201ENST00000583427 947 ntBASIC20.97■□□□□ 0.95
ALDH1A3P47895 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ALDH1A3P47895 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ALDH1A3P47895 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
ALDH1A3P47895 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ALDH1A3P47895 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.96■□□□□ 0.95
ALDH1A3P47895 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ALDH1A3P47895 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.96■□□□□ 0.95
ALDH1A3P47895 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
ALDH1A3P47895 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ALDH1A3P47895 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
ALDH1A3P47895 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
ALDH1A3P47895 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.96■□□□□ 0.95
ALDH1A3P47895 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ALDH1A3P47895 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ALDH1A3P47895 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.96■□□□□ 0.95
ALDH1A3P47895 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.96■□□□□ 0.95
ALDH1A3P47895 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.96■□□□□ 0.95
ALDH1A3P47895 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ALDH1A3P47895 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
ALDH1A3P47895 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ALDH1A3P47895 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ALDH1A3P47895 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ALDH1A3P47895 AC092720.2-201ENST00000602388 1665 ntBASIC20.96■□□□□ 0.95
ALDH1A3P47895 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.95
ALDH1A3P47895 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.95
ALDH1A3P47895 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ALDH1A3P47895 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.95■□□□□ 0.94
ALDH1A3P47895 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ALDH1A3P47895 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
ALDH1A3P47895 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
ALDH1A3P47895 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ALDH1A3P47895 BX088651.1-201ENST00000540551 451 ntBASIC20.95■□□□□ 0.94
ALDH1A3P47895 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
ALDH1A3P47895 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.95■□□□□ 0.94
ALDH1A3P47895 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.95■□□□□ 0.94
ALDH1A3P47895 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
ALDH1A3P47895 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
ALDH1A3P47895 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms