Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
H2AFXP16104 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
H2AFXP16104 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC20.64■□□□□ 0.89
H2AFXP16104 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
H2AFXP16104 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.64■□□□□ 0.89
H2AFXP16104 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC20.64■□□□□ 0.89
H2AFXP16104 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC20.64■□□□□ 0.89
H2AFXP16104 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
H2AFXP16104 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20.63■□□□□ 0.89
H2AFXP16104 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC20.63■□□□□ 0.89
H2AFXP16104 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
H2AFXP16104 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
H2AFXP16104 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
H2AFXP16104 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
H2AFXP16104 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.63■□□□□ 0.89
H2AFXP16104 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
H2AFXP16104 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.63■□□□□ 0.89
H2AFXP16104 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
H2AFXP16104 AC053503.5-201ENST00000601508 636 ntBASIC20.63■□□□□ 0.89
H2AFXP16104 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
H2AFXP16104 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
H2AFXP16104 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
H2AFXP16104 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
H2AFXP16104 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
H2AFXP16104 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
H2AFXP16104 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
H2AFXP16104 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
H2AFXP16104 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
H2AFXP16104 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
H2AFXP16104 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
H2AFXP16104 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
H2AFXP16104 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
H2AFXP16104 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
H2AFXP16104 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC20.62■□□□□ 0.89
H2AFXP16104 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
H2AFXP16104 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
H2AFXP16104 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
H2AFXP16104 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.62■□□□□ 0.89
H2AFXP16104 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
H2AFXP16104 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
H2AFXP16104 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
H2AFXP16104 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
H2AFXP16104 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
H2AFXP16104 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
H2AFXP16104 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
H2AFXP16104 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
H2AFXP16104 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
H2AFXP16104 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.62■□□□□ 0.89
H2AFXP16104 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.61■□□□□ 0.89
H2AFXP16104 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
H2AFXP16104 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
H2AFXP16104 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
H2AFXP16104 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
H2AFXP16104 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
H2AFXP16104 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.61■□□□□ 0.89
H2AFXP16104 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
H2AFXP16104 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
H2AFXP16104 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC20.61■□□□□ 0.89
H2AFXP16104 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
H2AFXP16104 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.61■□□□□ 0.89
H2AFXP16104 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.61■□□□□ 0.89
H2AFXP16104 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.61■□□□□ 0.89
H2AFXP16104 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.61■□□□□ 0.89
H2AFXP16104 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.61■□□□□ 0.89
H2AFXP16104 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.61■□□□□ 0.89
H2AFXP16104 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
H2AFXP16104 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
H2AFXP16104 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
H2AFXP16104 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC20.61■□□□□ 0.89
H2AFXP16104 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
H2AFXP16104 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
H2AFXP16104 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
H2AFXP16104 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
H2AFXP16104 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
H2AFXP16104 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
H2AFXP16104 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
H2AFXP16104 AC005224.4-201ENST00000583262 1652 ntBASIC20.61■□□□□ 0.89
H2AFXP16104 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.61■□□□□ 0.89
H2AFXP16104 PRORSD1P-202ENST00000563365 2154 ntBASIC20.61■□□□□ 0.89
H2AFXP16104 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC20.61■□□□□ 0.89
H2AFXP16104 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
H2AFXP16104 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.6■□□□□ 0.89
H2AFXP16104 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
H2AFXP16104 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.6■□□□□ 0.89
H2AFXP16104 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
H2AFXP16104 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
H2AFXP16104 AC099398.1-201ENST00000567919 2776 ntBASIC20.6■□□□□ 0.89
H2AFXP16104 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
H2AFXP16104 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.6■□□□□ 0.89
H2AFXP16104 AC116050.2-201ENST00000612102 1779 ntBASIC20.6■□□□□ 0.89
H2AFXP16104 Z98044.1-201ENST00000632503 1764 ntBASIC20.6■□□□□ 0.89
H2AFXP16104 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
H2AFXP16104 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
H2AFXP16104 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.6■□□□□ 0.89
H2AFXP16104 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
H2AFXP16104 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
H2AFXP16104 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
H2AFXP16104 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
H2AFXP16104 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
H2AFXP16104 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms