Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC12.81□□□□□ -0.364e-6■□□□□ 9.7
PRPF8Q6P2Q9 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC12.78□□□□□ -0.364e-6■□□□□ 9.7
PRPF8Q6P2Q9 SYS1-DBNDD2-204ENST00000475242 529 ntTSL 312.74□□□□□ -0.374e-6■□□□□ 9.7
PRPF8Q6P2Q9 TMEM37-203ENST00000417645 522 ntTSL 312.72□□□□□ -0.374e-6■□□□□ 9.7
PRPF8Q6P2Q9 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.384e-6■□□□□ 9.7
PRPF8Q6P2Q9 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC12.6□□□□□ -0.394e-6■□□□□ 9.7
PRPF8Q6P2Q9 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC12.46□□□□□ -0.414e-6■□□□□ 9.7
PRPF8Q6P2Q9 SHISA5-216ENST00000494854 1908 ntTSL 1 (best)12.46□□□□□ -0.414e-6■□□□□ 9.7
PRPF8Q6P2Q9 TOM1L2-211ENST00000577517 538 ntTSL 412.45□□□□□ -0.424e-6■□□□□ 9.7
PRPF8Q6P2Q9 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.424e-6■□□□□ 9.7
PRPF8Q6P2Q9 SDHAF4-202ENST00000468640 332 ntTSL 312.44□□□□□ -0.424e-6■□□□□ 9.7
PRPF8Q6P2Q9 MTSS1-209ENST00000520094 581 ntTSL 412.38□□□□□ -0.434e-6■□□□□ 9.7
PRPF8Q6P2Q9 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC12.26□□□□□ -0.454e-6■□□□□ 9.7
PRPF8Q6P2Q9 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.474e-6■□□□□ 9.7
PRPF8Q6P2Q9 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.474e-6■□□□□ 9.7
PRPF8Q6P2Q9 PLSCR1-206ENST00000469266 1257 ntTSL 1 (best)12.07□□□□□ -0.484e-6■□□□□ 9.7
PRPF8Q6P2Q9 TBL2-219ENST00000488915 708 ntTSL 212.07□□□□□ -0.484e-6■□□□□ 9.7
PRPF8Q6P2Q9 PSKH1-203ENST00000575198 185 ntTSL 311.99□□□□□ -0.494e-6■□□□□ 9.7
PRPF8Q6P2Q9 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC11.97□□□□□ -0.494e-6■□□□□ 9.7
PRPF8Q6P2Q9 S100A6-203ENST00000462776 479 ntTSL 211.87□□□□□ -0.514e-6■□□□□ 9.7
PRPF8Q6P2Q9 DNM1L-225ENST00000551076 556 ntTSL 411.82□□□□□ -0.524e-6■□□□□ 9.7
PRPF8Q6P2Q9 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.534e-6■□□□□ 9.7
PRPF8Q6P2Q9 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.534e-6■□□□□ 9.7
PRPF8Q6P2Q9 SOD1-204ENST00000476106 586 ntTSL 511.61□□□□□ -0.554e-6■□□□□ 9.7
PRPF8Q6P2Q9 NCOR2-212ENST00000448008 735 ntTSL 511.61□□□□□ -0.553e-10■□□□□ 9.7
PRPF8Q6P2Q9 IMPDH1-205ENST00000460045 671 ntTSL 311.58□□□□□ -0.564e-6■□□□□ 9.7
PRPF8Q6P2Q9 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.564e-6■□□□□ 9.7
PRPF8Q6P2Q9 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.584e-6■□□□□ 9.7
PRPF8Q6P2Q9 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.594e-6■□□□□ 9.7
PRPF8Q6P2Q9 NINJ1-204ENST00000489274 2026 ntTSL 211.27□□□□□ -0.613e-10■□□□□ 9.7
PRPF8Q6P2Q9 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC11.23□□□□□ -0.612e-7■□□□□ 9.7
PRPF8Q6P2Q9 DBNDD2-207ENST00000372722 1202 ntTSL 3 BASIC11.18□□□□□ -0.624e-6■□□□□ 9.7
PRPF8Q6P2Q9 PLD3-209ENST00000475983 731 ntTSL 211.05□□□□□ -0.644e-6■□□□□ 9.7
PRPF8Q6P2Q9 SHISA5-211ENST00000460758 1297 ntTSL 1 (best)10.99□□□□□ -0.654e-6■□□□□ 9.7
PRPF8Q6P2Q9 RNF166-206ENST00000564894 574 ntTSL 410.89□□□□□ -0.674e-6■□□□□ 9.7
PRPF8Q6P2Q9 S100A6-202ENST00000368720 673 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.674e-6■□□□□ 9.7
PRPF8Q6P2Q9 TBXAS1-207ENST00000438104 752 ntTSL 510.85□□□□□ -0.674e-6■□□□□ 9.7
PRPF8Q6P2Q9 TGFA-206ENST00000445399 812 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.674e-6■□□□□ 9.7
PRPF8Q6P2Q9 CSTF1-208ENST00000613138 562 ntTSL 410.84□□□□□ -0.674e-6■□□□□ 9.7
PRPF8Q6P2Q9 SOD1-202ENST00000389995 865 ntTSL 3 BASIC10.8□□□□□ -0.684e-6■□□□□ 9.7
PRPF8Q6P2Q9 PLSCR1-209ENST00000477974 415 ntTSL 310.66□□□□□ -0.74e-6■□□□□ 9.7
PRPF8Q6P2Q9 PLSCR1-219ENST00000494568 817 ntTSL 210.66□□□□□ -0.74e-6■□□□□ 9.7
PRPF8Q6P2Q9 SYS1-DBNDD2-202ENST00000452133 674 ntAPPRIS ALT2 TSL 3 BASIC10.59□□□□□ -0.714e-6■□□□□ 9.7
PRPF8Q6P2Q9 DNM1L-220ENST00000549701 2487 ntTSL 1 (best) BASIC10.58□□□□□ -0.724e-6■□□□□ 9.7
PRPF8Q6P2Q9 FKBP9-205ENST00000468510 653 ntTSL 210.55□□□□□ -0.724e-6■□□□□ 9.7
PRPF8Q6P2Q9 VPS51-210ENST00000531146 594 ntTSL 210.53□□□□□ -0.724e-6■□□□□ 9.7
PRPF8Q6P2Q9 LMBR1L-218ENST00000551143 578 ntTSL 310.4□□□□□ -0.744e-6■□□□□ 9.7
PRPF8Q6P2Q9 TGFA-208ENST00000460808 470 ntTSL 410.24□□□□□ -0.774e-6■□□□□ 9.7
PRPF8Q6P2Q9 TIRAP-201ENST00000392678 1264 ntTSL 1 (best) BASIC10.14□□□□□ -0.794e-6■□□□□ 9.7
PRPF8Q6P2Q9 TIRAP-202ENST00000392679 2195 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.84e-6■□□□□ 9.7
PRPF8Q6P2Q9 LMBR1L-228ENST00000552879 568 ntTSL 49.95□□□□□ -0.824e-6■□□□□ 9.7
PRPF8Q6P2Q9 PDLIM5-220ENST00000514830 802 ntTSL 29.95□□□□□ -0.824e-6■□□□□ 9.7
PRPF8Q6P2Q9 NUDT9-203ENST00000473942 2458 ntTSL 1 (best) BASIC9.89□□□□□ -0.834e-6■□□□□ 9.7
PRPF8Q6P2Q9 TGFA-201ENST00000295400 4310 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.834e-6■□□□□ 9.7
PRPF8Q6P2Q9 SACS-202ENST00000402364 15134 ntTSL 2 BASIC9.86□□□□□ -0.834e-6■□□□□ 9.7
PRPF8Q6P2Q9 MIR4747-201ENST00000584057 54 ntBASIC9.81□□□□□ -0.844e-6■□□□□ 9.7
PRPF8Q6P2Q9 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC9.73□□□□□ -0.854e-6■□□□□ 9.7
PRPF8Q6P2Q9 LAMB1-207ENST00000468999 764 ntTSL 29.68□□□□□ -0.864e-6■□□□□ 9.7
PRPF8Q6P2Q9 SHISA5-213ENST00000466424 673 ntTSL 29.65□□□□□ -0.864e-6■□□□□ 9.7
PRPF8Q6P2Q9 TGFA-203ENST00000418333 1225 ntAPPRIS ALT1 TSL 1 (best) BASIC9.61□□□□□ -0.874e-6■□□□□ 9.7
PRPF8Q6P2Q9 FKBP9-202ENST00000418354 780 ntTSL 29.55□□□□□ -0.884e-6■□□□□ 9.7
PRPF8Q6P2Q9 N4BP1-202ENST00000564124 2485 ntTSL 59.49□□□□□ -0.894e-6■□□□□ 9.7
PRPF8Q6P2Q9 EIPR1-213ENST00000482570 582 ntTSL 29.23□□□□□ -0.934e-6■□□□□ 9.7
PRPF8Q6P2Q9 DNM1L-230ENST00000553257 2699 ntTSL 2 BASIC9.18□□□□□ -0.944e-6■□□□□ 9.7
PRPF8Q6P2Q9 LMBR1L-227ENST00000552577 2083 ntTSL 28.95□□□□□ -0.984e-6■□□□□ 9.7
PRPF8Q6P2Q9 DNM1L-222ENST00000550011 576 ntTSL 48.92□□□□□ -0.984e-6■□□□□ 9.7
PRPF8Q6P2Q9 FNBP1L-202ENST00000271234 4212 ntAPPRIS P4 TSL 5 BASIC8.91□□□□□ -0.984e-6■□□□□ 9.7
PRPF8Q6P2Q9 FNBP1L-201ENST00000260506 5341 ntAPPRIS ALT1 TSL 1 (best) BASIC8.78□□□□□ -14e-6■□□□□ 9.7
PRPF8Q6P2Q9 GMFB-207ENST00000554682 298 ntTSL 58.75□□□□□ -1.014e-6■□□□□ 9.7
PRPF8Q6P2Q9 PDLIM5-206ENST00000437932 5713 ntTSL 5 BASIC8.73□□□□□ -1.014e-6■□□□□ 9.7
PRPF8Q6P2Q9 FGFR1OP2-202ENST00000327214 2790 ntAPPRIS P1 TSL 2 BASIC8.7□□□□□ -1.022e-7■□□□□ 9.7
PRPF8Q6P2Q9 LMBR1L-224ENST00000552141 756 ntTSL 28.69□□□□□ -1.024e-6■□□□□ 9.7
PRPF8Q6P2Q9 TBXAS1-219ENST00000493340 703 ntTSL 48.66□□□□□ -1.024e-6■□□□□ 9.7
PRPF8Q6P2Q9 MALT1-205ENST00000591792 565 ntTSL 48.57□□□□□ -1.044e-6■□□□□ 9.7
PRPF8Q6P2Q9 FKBP9-212ENST00000490776 2699 ntTSL 2 BASIC8.45□□□□□ -1.064e-6■□□□□ 9.7
PRPF8Q6P2Q9 CSTF1-201ENST00000217109 4290 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.114e-6■□□□□ 9.7
PRPF8Q6P2Q9 TBXAS1-211ENST00000462053 459 ntTSL 38.08□□□□□ -1.124e-6■□□□□ 9.7
PRPF8Q6P2Q9 TBXAS1-214ENST00000473948 241 ntTSL 57.81□□□□□ -1.164e-6■□□□□ 9.7
PRPF8Q6P2Q9 S100A6-204ENST00000462951 311 ntTSL 1 (best)7.78□□□□□ -1.164e-6■□□□□ 9.7
PRPF8Q6P2Q9 CSTF1-206ENST00000493039 2234 ntTSL 57.71□□□□□ -1.184e-6■□□□□ 9.7
PRPF8Q6P2Q9 FNBP1L-204ENST00000424449 1518 ntTSL 27.68□□□□□ -1.184e-6■□□□□ 9.7
PRPF8Q6P2Q9 PDLIM5-223ENST00000627587 1853 ntTSL 27.68□□□□□ -1.184e-6■□□□□ 9.7
PRPF8Q6P2Q9 CYFIP1-202ENST00000561263 707 ntTSL 27.66□□□□□ -1.184e-6■□□□□ 9.7
PRPF8Q6P2Q9 DNM1L-218ENST00000548750 813 ntTSL 37.66□□□□□ -1.184e-6■□□□□ 9.7
PRPF8Q6P2Q9 PDLIM5-207ENST00000503974 2081 ntTSL 2 BASIC7.44□□□□□ -1.224e-6■□□□□ 9.7
PRPF8Q6P2Q9 EIPR1-210ENST00000463662 757 ntTSL 37.42□□□□□ -1.224e-6■□□□□ 9.7
PRPF8Q6P2Q9 DNM1L-211ENST00000547312 2393 ntTSL 1 (best) BASIC7.41□□□□□ -1.224e-6■□□□□ 9.7
PRPF8Q6P2Q9 PDLIM5-213ENST00000509357 554 ntTSL 57.35□□□□□ -1.234e-6■□□□□ 9.7
PRPF8Q6P2Q9 DNM1L-224ENST00000550154 550 ntTSL 57.34□□□□□ -1.234e-6■□□□□ 9.7
PRPF8Q6P2Q9 DNM1L-206ENST00000434676 1008 ntTSL 27.32□□□□□ -1.244e-6■□□□□ 9.7
PRPF8Q6P2Q9 ANKLE2-212ENST00000546061 562 ntTSL 37.3□□□□□ -1.244e-6■□□□□ 9.7
PRPF8Q6P2Q9 DNM1L-226ENST00000551476 560 ntTSL 57.28□□□□□ -1.244e-6■□□□□ 9.7
PRPF8Q6P2Q9 TIRAP-207ENST00000488598 889 ntTSL 57.24□□□□□ -1.254e-6■□□□□ 9.7
PRPF8Q6P2Q9 DNM1L-204ENST00000413295 1064 ntTSL 27.22□□□□□ -1.254e-6■□□□□ 9.7
PRPF8Q6P2Q9 CSTF1-203ENST00000428552 554 ntTSL 37.22□□□□□ -1.254e-6■□□□□ 9.7
PRPF8Q6P2Q9 DNM1L-215ENST00000547932 417 ntTSL 47.11□□□□□ -1.274e-6■□□□□ 9.7
PRPF8Q6P2Q9 DNM1L-227ENST00000551643 538 ntTSL 47.11□□□□□ -1.274e-6■□□□□ 9.7
PRPF8Q6P2Q9 TIRAP-204ENST00000462401 545 ntTSL 46.99□□□□□ -1.294e-6■□□□□ 9.7
PRPF8Q6P2Q9 PDLIM5-201ENST00000317968 6083 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.324e-6■□□□□ 9.7
PRPF8Q6P2Q9 PDLIM5-222ENST00000615540 6219 ntTSL 1 (best) BASIC6.77□□□□□ -1.334e-6■□□□□ 9.7
Retrieved 100 of 73,762 protein–RNA pairs in 518.6 ms