RNA–Protein interactions for RNA: ENST00000551143.5

LMBR1L-218, Transcript of limb development membrane protein 1 like, humanhuman

TSL 3

Gene LMBR1L, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1L-218ENST00000551143 NISCHQ9Y2I1 1504 aa29.81■■■□□ 2.36
LMBR1L-218ENST00000551143 CCDC180Q9P1Z9 1646 aa26.39■■□□□ 1.81
LMBR1L-218ENST00000551143 ABCC9O60706 1549 aa25.61■■□□□ 1.69
LMBR1L-218ENST00000551143 DCAF8L2P0C7V8 631 aa24.93■■□□□ 1.58
LMBR1L-218ENST00000551143 ZCCHC6Q5VYS8 1495 aaKnown RBP24.86■■□□□ 1.57
LMBR1L-218ENST00000551143 NACADO15069 1562 aa24.8■■□□□ 1.56
LMBR1L-218ENST00000551143 RB1CC1Q8TDY2 1594 aa24.76■■□□□ 1.55
LMBR1L-218ENST00000551143 MYO15BQ96JP2 1530 aa24.72■■□□□ 1.55
LMBR1L-218ENST00000551143 DCAF1Q9Y4B6 1507 aa24.69■■□□□ 1.54
LMBR1L-218ENST00000551143 UNC13AQ9UPW8 1703 aa24.1■■□□□ 1.45
LMBR1L-218ENST00000551143 SCRIBQ14160 1630 aa24.09■■□□□ 1.45
LMBR1L-218ENST00000551143 PABPN1Q86U42 306 aaKnown RBP eCLIP24.01■■□□□ 1.431e-10■■■□□ 19
LMBR1L-218ENST00000551143 BICRAQ9NZM4 1560 aa23.92■■□□□ 1.42
LMBR1L-218ENST00000551143 SHROOM4Q9ULL8 1493 aa23.79■■□□□ 1.4
LMBR1L-218ENST00000551143 EIF4G1Q04637 1599 aaKnown RBP23.31■■□□□ 1.32
LMBR1L-218ENST00000551143 DNAJC5BQ9UF47 199 aa23.28■■□□□ 1.32
LMBR1L-218ENST00000551143 CECR2Q9BXF3 1484 aa23.17■■□□□ 1.3
LMBR1L-218ENST00000551143 CC2D2AQ9P2K1 1620 aa23.16■■□□□ 1.3
LMBR1L-218ENST00000551143 BAZ1AQ9NRL2 1556 aaPredicted RBP23.12■■□□□ 1.29
LMBR1L-218ENST00000551143 SMARCA4P51532 1647 aa23.06■■□□□ 1.28
LMBR1L-218ENST00000551143 MROH2BQ7Z745 1585 aa22.96■■□□□ 1.27
LMBR1L-218ENST00000551143 SMARCA2P51531 1590 aa22.92■■□□□ 1.26
LMBR1L-218ENST00000551143 ATAD2BQ9ULI0 1458 aa22.91■■□□□ 1.26
LMBR1L-218ENST00000551143 NCAPD3P42695 1498 aa22.88■■□□□ 1.25
LMBR1L-218ENST00000551143 PEG3Q9GZU2 1588 aa22.84■■□□□ 1.25
LMBR1L-218ENST00000551143 RSF1Q96T23 1441 aaPredicted RBP22.81■■□□□ 1.24
LMBR1L-218ENST00000551143 HMGXB3Q12766 1538 aa22.76■■□□□ 1.23
LMBR1L-218ENST00000551143 BAZ1BQ9UIG0 1483 aaKnown RBP22.75■■□□□ 1.23
LMBR1L-218ENST00000551143 WIZO95785 1651 aa22.71■■□□□ 1.23
LMBR1L-218ENST00000551143 TOP2AP11388 1531 aaKnown RBP22.52■■□□□ 1.19
LMBR1L-218ENST00000551143 SUPT5HO00267 1087 aaKnown RBP22.49■■□□□ 1.19
LMBR1L-218ENST00000551143 CCDC88BA6NC98 1476 aa22.27■■□□□ 1.16
LMBR1L-218ENST00000551143 CADPSQ9ULU8 1353 aa22.25■■□□□ 1.15
LMBR1L-218ENST00000551143 LAMC3Q9Y6N6 1575 aa22.22■■□□□ 1.15
LMBR1L-218ENST00000551143 NESP48681 1621 aa22.2■■□□□ 1.14
LMBR1L-218ENST00000551143 CFTRP13569 1480 aa22.13■■□□□ 1.13
LMBR1L-218ENST00000551143 PDS5BQ9NTI5 1447 aa22.13■■□□□ 1.13
LMBR1L-218ENST00000551143 ERCC6Q03468 1493 aa22.11■■□□□ 1.13
LMBR1L-218ENST00000551143 FANCD2Q9BXW9 1451 aa21.96■■□□□ 1.11
LMBR1L-218ENST00000551143 PRDM2Q13029 1718 aa21.93■■□□□ 1.1
LMBR1L-218ENST00000551143 KIF21AQ7Z4S6 1674 aa21.92■■□□□ 1.1
LMBR1L-218ENST00000551143 CEP164Q9UPV0 1460 aa21.92■■□□□ 1.1
LMBR1L-218ENST00000551143 MRC2Q9UBG0 1479 aa21.83■■□□□ 1.09
LMBR1L-218ENST00000551143 THOC2Q8NI27 1593 aaKnown RBP21.79■■□□□ 1.08
LMBR1L-218ENST00000551143 CUX2O14529 1486 aa21.77■■□□□ 1.08
LMBR1L-218ENST00000551143 WDR62O43379 1518 aa21.72■■□□□ 1.07
LMBR1L-218ENST00000551143 ABCC8Q09428 1581 aa21.71■■□□□ 1.07
LMBR1L-218ENST00000551143 URB2Q14146 1524 aaKnown RBP21.69■■□□□ 1.06
LMBR1L-218ENST00000551143 TOPBP1Q92547 1522 aa21.62■■□□□ 1.05
LMBR1L-218ENST00000551143 DNMBPQ6XZF7 1577 aa21.61■■□□□ 1.05
LMBR1L-218ENST00000551143 WRNQ14191 1432 aaPredicted RBP eCLIP21.53■■□□□ 1.04
LMBR1L-218ENST00000551143 CUX1P39880 1505 aa21.52■■□□□ 1.04
LMBR1L-218ENST00000551143 IFT140Q96RY7 1462 aa21.47■■□□□ 1.03
LMBR1L-218ENST00000551143 POLA1P09884 1462 aaPredicted RBP21.45■■□□□ 1.03
LMBR1L-218ENST00000551143 FGD5Q6ZNL6 1462 aa21.44■■□□□ 1.02
LMBR1L-218ENST00000551143 SOGA1O94964 1423 aa21.43■■□□□ 1.02
LMBR1L-218ENST00000551143 TOP2BQ02880 1626 aa21.41■■□□□ 1.02
LMBR1L-218ENST00000551143 BIVM-ERCC5R4GMW8 1640 aa21.39■■□□□ 1.01
LMBR1L-218ENST00000551143 SYNJ1O43426 1573 aa21.39■■□□□ 1.01
LMBR1L-218ENST00000551143 RAD54L2Q9Y4B4 1467 aa21.35■■□□□ 1.01
LMBR1L-218ENST00000551143 TARBP1Q13395 1621 aaKnown RBP21.33■■□□□ 1
LMBR1L-218ENST00000551143 ZNF608Q9ULD9 1512 aaPredicted RBP21.29■■□□□ 1
LMBR1L-218ENST00000551143 TRIM41Q8WV44 630 aa21.26■□□□□ 0.99
LMBR1L-218ENST00000551143 TDRD9Q8NDG6 1382 aaKnown RBP21.25■□□□□ 0.99
LMBR1L-218ENST00000551143 ABCA10Q8WWZ4 1543 aa21.25■□□□□ 0.99
LMBR1L-218ENST00000551143 WDR97A6NE52 1622 aa21.24■□□□□ 0.99
LMBR1L-218ENST00000551143 AQRO60306 1485 aaKnown RBP eCLIP21.23■□□□□ 0.993e-7■■■■■ 27.8
LMBR1L-218ENST00000551143 EIF4G3O43432 1585 aaKnown RBP21.2■□□□□ 0.98
LMBR1L-218ENST00000551143 GAPVD1Q14C86 1478 aa21.16■□□□□ 0.98
LMBR1L-218ENST00000551143 GRIN2BQ13224 1484 aa21.13■□□□□ 0.97
LMBR1L-218ENST00000551143 ABCA5Q8WWZ7 1642 aa21.11■□□□□ 0.97
LMBR1L-218ENST00000551143 CHIC1Q5VXU3 224 aa21.1■□□□□ 0.97
LMBR1L-218ENST00000551143 KIF27Q86VH2 1401 aa21.1■□□□□ 0.97
LMBR1L-218ENST00000551143 MAGI1Q96QZ7 1491 aaPredicted RBP21.05■□□□□ 0.96
LMBR1L-218ENST00000551143 PBRM1Q86U86 1689 aa21.03■□□□□ 0.96
LMBR1L-218ENST00000551143 SNAPC4Q5SXM2 1469 aa21.03■□□□□ 0.96
LMBR1L-218ENST00000551143 FBLN2P98095 1184 aa21.02■□□□□ 0.96
LMBR1L-218ENST00000551143 ERICH3Q5RHP9 1530 aa21.01■□□□□ 0.95
LMBR1L-218ENST00000551143 CHMP7Q8WUX9 453 aaPredicted RBP21.01■□□□□ 0.95
LMBR1L-218ENST00000551143 OSCARQ8IYS5 282 aa20.99■□□□□ 0.95
LMBR1L-218ENST00000551143 IGF1RP08069 1367 aa20.96■□□□□ 0.95
LMBR1L-218ENST00000551143 SYNJ2O15056 1496 aa20.95■□□□□ 0.94
LMBR1L-218ENST00000551143 FHAD1B1AJZ9 1412 aa20.95■□□□□ 0.94
LMBR1L-218ENST00000551143 CHD1O14646 1710 aa20.89■□□□□ 0.93
LMBR1L-218ENST00000551143 ADAMTS12P58397 1594 aa20.89■□□□□ 0.93
LMBR1L-218ENST00000551143 RUSC2Q8N2Y8 1516 aa20.88■□□□□ 0.93
LMBR1L-218ENST00000551143 DNAJC5Q9H3Z4 198 aa20.88■□□□□ 0.93
LMBR1L-218ENST00000551143 EEA1Q15075 1411 aa20.87■□□□□ 0.93
LMBR1L-218ENST00000551143 CUL7Q14999 1698 aa20.86■□□□□ 0.93
LMBR1L-218ENST00000551143 CARMIL1Q5VZK9 1371 aa20.85■□□□□ 0.93
LMBR1L-218ENST00000551143 GRIN2AQ12879 1464 aa20.83■□□□□ 0.93
LMBR1L-218ENST00000551143 CSRNP3Q8WYN3 585 aa20.82■□□□□ 0.92
LMBR1L-218ENST00000551143 FAM9AQ8IZU1 332 aaPredicted RBP20.77■□□□□ 0.92
LMBR1L-218ENST00000551143 RAPGEF2Q9Y4G8 1499 aa20.75■□□□□ 0.91
LMBR1L-218ENST00000551143 NUP160Q12769 1436 aa20.72■□□□□ 0.91
LMBR1L-218ENST00000551143 PRXQ9BXM0 1461 aa20.69■□□□□ 0.9
LMBR1L-218ENST00000551143 CLASP1Q7Z460 1538 aa20.68■□□□□ 0.9
LMBR1L-218ENST00000551143 CEP170Q5SW79 1584 aa20.68■□□□□ 0.9
LMBR1L-218ENST00000551143 KIAA0586Q9BVV6 1533 aa20.62■□□□□ 0.89
LMBR1L-218ENST00000551143 JPH4Q96JJ6 628 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms