RNA–Protein interactions for RNA: ENST00000475983.1

PLD3-209, Transcript of phospholipase D family member 3, humanhuman

TSL 2

Gene PLD3, Length 731 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLD3-209ENST00000475983 NISCHQ9Y2I1 1504 aa31.61■■■□□ 2.65
PLD3-209ENST00000475983 CCDC180Q9P1Z9 1646 aa27.83■■■□□ 2.05
PLD3-209ENST00000475983 ABCC9O60706 1549 aa26.65■■□□□ 1.86
PLD3-209ENST00000475983 ZCCHC6Q5VYS8 1495 aaKnown RBP26.44■■□□□ 1.82
PLD3-209ENST00000475983 DCAF8L2P0C7V8 631 aa26.21■■□□□ 1.79
PLD3-209ENST00000475983 DCAF1Q9Y4B6 1507 aa26.19■■□□□ 1.78
PLD3-209ENST00000475983 MYO15BQ96JP2 1530 aa26.07■■□□□ 1.76
PLD3-209ENST00000475983 NACADO15069 1562 aa26.03■■□□□ 1.76
PLD3-209ENST00000475983 RB1CC1Q8TDY2 1594 aa25.91■■□□□ 1.74
PLD3-209ENST00000475983 SCRIBQ14160 1630 aa25.43■■□□□ 1.66
PLD3-209ENST00000475983 UNC13AQ9UPW8 1703 aa25.34■■□□□ 1.65
PLD3-209ENST00000475983 SHROOM4Q9ULL8 1493 aa25.34■■□□□ 1.65
PLD3-209ENST00000475983 AEBP2Q6ZN18 517 aaPredicted RBP25.11■■□□□ 1.61
PLD3-209ENST00000475983 BICRAQ9NZM4 1560 aa25.1■■□□□ 1.61
PLD3-209ENST00000475983 PABPN1Q86U42 306 aaKnown RBP eCLIP25.02■■□□□ 1.6
PLD3-209ENST00000475983 CECR2Q9BXF3 1484 aa24.55■■□□□ 1.52
PLD3-209ENST00000475983 BAZ1AQ9NRL2 1556 aaPredicted RBP24.46■■□□□ 1.51
PLD3-209ENST00000475983 SMARCA4P51532 1647 aa24.39■■□□□ 1.5
PLD3-209ENST00000475983 EIF4G1Q04637 1599 aaKnown RBP24.38■■□□□ 1.49
PLD3-209ENST00000475983 MROH2BQ7Z745 1585 aa24.36■■□□□ 1.49
PLD3-209ENST00000475983 RSF1Q96T23 1441 aaPredicted RBP24.31■■□□□ 1.48
PLD3-209ENST00000475983 SUPT5HO00267 1087 aaKnown RBP24.18■■□□□ 1.46
PLD3-209ENST00000475983 PEG3Q9GZU2 1588 aa24.15■■□□□ 1.46
PLD3-209ENST00000475983 WIZO95785 1651 aa24.15■■□□□ 1.46
PLD3-209ENST00000475983 CC2D2AQ9P2K1 1620 aa24.14■■□□□ 1.46
PLD3-209ENST00000475983 DNAJC5BQ9UF47 199 aa24.14■■□□□ 1.45
PLD3-209ENST00000475983 ATAD2BQ9ULI0 1458 aa24.12■■□□□ 1.45
PLD3-209ENST00000475983 SMARCA2P51531 1590 aa24.12■■□□□ 1.45
PLD3-209ENST00000475983 CHIC1Q5VXU3 224 aa24.1■■□□□ 1.45
PLD3-209ENST00000475983 NCAPD3P42695 1498 aa24.02■■□□□ 1.44
PLD3-209ENST00000475983 BAZ1BQ9UIG0 1483 aaKnown RBP23.94■■□□□ 1.42
PLD3-209ENST00000475983 HMGXB3Q12766 1538 aa23.94■■□□□ 1.42
PLD3-209ENST00000475983 TOP2AP11388 1531 aaKnown RBP23.91■■□□□ 1.42
PLD3-209ENST00000475983 CCDC88BA6NC98 1476 aa23.64■■□□□ 1.38
PLD3-209ENST00000475983 CADPSQ9ULU8 1353 aa23.36■■□□□ 1.33
PLD3-209ENST00000475983 CFTRP13569 1480 aa23.33■■□□□ 1.33
PLD3-209ENST00000475983 LAMC3Q9Y6N6 1575 aa23.28■■□□□ 1.32
PLD3-209ENST00000475983 NESP48681 1621 aa23.24■■□□□ 1.31
PLD3-209ENST00000475983 PRDM2Q13029 1718 aa23.22■■□□□ 1.31
PLD3-209ENST00000475983 PDS5BQ9NTI5 1447 aa23.12■■□□□ 1.29
PLD3-209ENST00000475983 FANCD2Q9BXW9 1451 aa23.07■■□□□ 1.28
PLD3-209ENST00000475983 KIF21AQ7Z4S6 1674 aa23■■□□□ 1.27
PLD3-209ENST00000475983 CEP164Q9UPV0 1460 aa22.98■■□□□ 1.27
PLD3-209ENST00000475983 ABCC8Q09428 1581 aa22.94■■□□□ 1.26
PLD3-209ENST00000475983 ERCC6Q03468 1493 aa22.92■■□□□ 1.26
PLD3-209ENST00000475983 WRNQ14191 1432 aaPredicted RBP eCLIP22.91■■□□□ 1.26
PLD3-209ENST00000475983 DNAJC5Q9H3Z4 198 aa22.85■■□□□ 1.25
PLD3-209ENST00000475983 MRC2Q9UBG0 1479 aa22.82■■□□□ 1.24
PLD3-209ENST00000475983 TRIM41Q8WV44 630 aa22.82■■□□□ 1.24
PLD3-209ENST00000475983 CUX1P39880 1505 aa22.82■■□□□ 1.24
PLD3-209ENST00000475983 SYNJ1O43426 1573 aa22.8■■□□□ 1.24
PLD3-209ENST00000475983 DNMBPQ6XZF7 1577 aa22.8■■□□□ 1.24
PLD3-209ENST00000475983 TOP2BQ02880 1626 aa22.79■■□□□ 1.24
PLD3-209ENST00000475983 URB2Q14146 1524 aaKnown RBP22.79■■□□□ 1.24
PLD3-209ENST00000475983 BIVM-ERCC5R4GMW8 1640 aa22.79■■□□□ 1.24
PLD3-209ENST00000475983 TOPBP1Q92547 1522 aa22.77■■□□□ 1.24
PLD3-209ENST00000475983 THOC2Q8NI27 1593 aaKnown RBP22.75■■□□□ 1.23
PLD3-209ENST00000475983 WDR62O43379 1518 aa22.72■■□□□ 1.23
PLD3-209ENST00000475983 FGD5Q6ZNL6 1462 aa22.65■■□□□ 1.22
PLD3-209ENST00000475983 POLA1P09884 1462 aaPredicted RBP22.61■■□□□ 1.21
PLD3-209ENST00000475983 SOGA1O94964 1423 aa22.56■■□□□ 1.2
PLD3-209ENST00000475983 CUX2O14529 1486 aa22.52■■□□□ 1.2
PLD3-209ENST00000475983 RAD54L2Q9Y4B4 1467 aa22.52■■□□□ 1.2
PLD3-209ENST00000475983 IFT140Q96RY7 1462 aa22.48■■□□□ 1.19
PLD3-209ENST00000475983 TARBP1Q13395 1621 aaKnown RBP22.47■■□□□ 1.19
PLD3-209ENST00000475983 ABCA10Q8WWZ4 1543 aa22.47■■□□□ 1.19
PLD3-209ENST00000475983 WDR97A6NE52 1622 aa22.42■■□□□ 1.18
PLD3-209ENST00000475983 KIF27Q86VH2 1401 aa22.39■■□□□ 1.17
PLD3-209ENST00000475983 RUSC2Q8N2Y8 1516 aa22.37■■□□□ 1.17
PLD3-209ENST00000475983 EEA1Q15075 1411 aa22.37■■□□□ 1.17
PLD3-209ENST00000475983 TDRD9Q8NDG6 1382 aaKnown RBP22.35■■□□□ 1.17
PLD3-209ENST00000475983 FAM9AQ8IZU1 332 aaPredicted RBP22.32■■□□□ 1.16
PLD3-209ENST00000475983 ZNF608Q9ULD9 1512 aaPredicted RBP22.31■■□□□ 1.16
PLD3-209ENST00000475983 ABCA5Q8WWZ7 1642 aa22.31■■□□□ 1.16
PLD3-209ENST00000475983 GAPVD1Q14C86 1478 aa22.29■■□□□ 1.16
PLD3-209ENST00000475983 AQRO60306 1485 aaKnown RBP eCLIP22.28■■□□□ 1.164e-8■■■■■ 31.9
PLD3-209ENST00000475983 CSRNP3Q8WYN3 585 aa22.28■■□□□ 1.16
PLD3-209ENST00000475983 EIF4G3O43432 1585 aaKnown RBP22.25■■□□□ 1.15
PLD3-209ENST00000475983 IGF1RP08069 1367 aa22.24■■□□□ 1.15
PLD3-209ENST00000475983 ERICH3Q5RHP9 1530 aa22.21■■□□□ 1.15
PLD3-209ENST00000475983 PBRM1Q86U86 1689 aa22.21■■□□□ 1.15
PLD3-209ENST00000475983 GRIN2BQ13224 1484 aa22.21■■□□□ 1.15
PLD3-209ENST00000475983 CUL7Q14999 1698 aa22.13■■□□□ 1.13
PLD3-209ENST00000475983 CARMIL1Q5VZK9 1371 aa22.12■■□□□ 1.13
PLD3-209ENST00000475983 PRXQ9BXM0 1461 aa22.11■■□□□ 1.13
PLD3-209ENST00000475983 KIF21BO75037 1637 aa22.08■■□□□ 1.13
PLD3-209ENST00000475983 SNAPC4Q5SXM2 1469 aa22.08■■□□□ 1.12
PLD3-209ENST00000475983 MAGI1Q96QZ7 1491 aaPredicted RBP22.08■■□□□ 1.12
PLD3-209ENST00000475983 FHAD1B1AJZ9 1412 aa22.06■■□□□ 1.12
PLD3-209ENST00000475983 ADAMTS12P58397 1594 aa22.04■■□□□ 1.12
PLD3-209ENST00000475983 RAPGEF2Q9Y4G8 1499 aa22.04■■□□□ 1.12
PLD3-209ENST00000475983 LOC105371045A0A1W2PR82 267 aa22■■□□□ 1.11
PLD3-209ENST00000475983 GOLGA3Q08378 1498 aa22■■□□□ 1.11
PLD3-209ENST00000475983 SYNJ2O15056 1496 aa21.99■■□□□ 1.11
PLD3-209ENST00000475983 EHMT2Q96KQ7 1210 aa21.97■■□□□ 1.11
PLD3-209ENST00000475983 CHMP7Q8WUX9 453 aaPredicted RBP21.96■■□□□ 1.11
PLD3-209ENST00000475983 UBTFP17480 764 aaKnown RBP21.92■■□□□ 1.1
PLD3-209ENST00000475983 FBLN2P98095 1184 aa21.92■■□□□ 1.1
PLD3-209ENST00000475983 GRIN2AQ12879 1464 aa21.91■■□□□ 1.1
PLD3-209ENST00000475983 CHD1O14646 1710 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 196.7 ms