RNA–Protein interactions for RNA: ENST00000564124.5

N4BP1-202, Transcript of NEDD4 binding protein 1, humanhuman

TSL 5

Gene N4BP1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
N4BP1-202ENST00000564124 NISCHQ9Y2I1 1504 aa25.53■■□□□ 1.68
N4BP1-202ENST00000564124 HRCP23327 699 aa22.52■■□□□ 1.2
N4BP1-202ENST00000564124 SHROOM4Q9ULL8 1493 aa22.51■■□□□ 1.19
N4BP1-202ENST00000564124 SUPT5HO00267 1087 aaKnown RBP22.33■■□□□ 1.17
N4BP1-202ENST00000564124 MYO15BQ96JP2 1530 aa22.26■■□□□ 1.15
N4BP1-202ENST00000564124 PPARGC1BQ86YN6 1023 aaKnown RBP22.12■■□□□ 1.13
N4BP1-202ENST00000564124 PCGF6Q9BYE7 350 aa22.09■■□□□ 1.13
N4BP1-202ENST00000564124 CHIC1Q5VXU3 224 aa22■■□□□ 1.11
N4BP1-202ENST00000564124 ZCCHC6Q5VYS8 1495 aaKnown RBP21.75■■□□□ 1.07
N4BP1-202ENST00000564124 DCAF1Q9Y4B6 1507 aa21.66■■□□□ 1.06
N4BP1-202ENST00000564124 LOC105371045A0A1W2PR82 267 aa21.48■■□□□ 1.03
N4BP1-202ENST00000564124 PELP1Q8IZL8 1130 aaKnown RBP21.44■■□□□ 1.02
N4BP1-202ENST00000564124 CCDC180Q9P1Z9 1646 aa21.41■■□□□ 1.02
N4BP1-202ENST00000564124 TRIM26Q12899 539 aaPredicted RBP21.37■■□□□ 1.01
N4BP1-202ENST00000564124 SCAF1Q9H7N4 1312 aaKnown RBP21.3■■□□□ 1
N4BP1-202ENST00000564124 DCAF8L2P0C7V8 631 aa21.11■□□□□ 0.97
N4BP1-202ENST00000564124 ZEB1P37275 1124 aaPredicted RBP21.1■□□□□ 0.97
N4BP1-202ENST00000564124 ACIN1Q9UKV3 1341 aaKnown RBP20.74■□□□□ 0.91
N4BP1-202ENST00000564124 NEUROD1Q13562 356 aa20.73■□□□□ 0.91
N4BP1-202ENST00000564124 ABCC9O60706 1549 aa20.67■□□□□ 0.9
N4BP1-202ENST00000564124 FAM9AQ8IZU1 332 aaPredicted RBP20.65■□□□□ 0.9
N4BP1-202ENST00000564124 TRIM41Q8WV44 630 aa20.63■□□□□ 0.89
N4BP1-202ENST00000564124 EHMT2Q96KQ7 1210 aa20.57■□□□□ 0.88
N4BP1-202ENST00000564124 GTF3C3Q9Y5Q9 886 aa20.57■□□□□ 0.88
N4BP1-202ENST00000564124 RSF1Q96T23 1441 aaPredicted RBP20.53■□□□□ 0.88
N4BP1-202ENST00000564124 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.52■□□□□ 0.88
N4BP1-202ENST00000564124 MYT1Q01538 1121 aa20.51■□□□□ 0.87
N4BP1-202ENST00000564124 RB1CC1Q8TDY2 1594 aa20.51■□□□□ 0.87
N4BP1-202ENST00000564124 DIEXFQ68CQ4 756 aaKnown RBP20.42■□□□□ 0.86
N4BP1-202ENST00000564124 CCER1Q8TC90 406 aaPredicted RBP20.41■□□□□ 0.86
N4BP1-202ENST00000564124 CENPBP07199 599 aaPredicted RBP20.39■□□□□ 0.85
N4BP1-202ENST00000564124 SCRIBQ14160 1630 aa20.27■□□□□ 0.84
N4BP1-202ENST00000564124 YTHDC1Q96MU7 727 aaKnown RBP20.09■□□□□ 0.81
N4BP1-202ENST00000564124 TTBK1Q5TCY1 1321 aaPredicted RBP20.08■□□□□ 0.81
N4BP1-202ENST00000564124 ZNF316A6NFI3 1004 aaPredicted RBP20.04■□□□□ 0.8
N4BP1-202ENST00000564124 CECR2Q9BXF3 1484 aa20.01■□□□□ 0.79
N4BP1-202ENST00000564124 WRNQ14191 1432 aaPredicted RBP eCLIP19.99■□□□□ 0.79
N4BP1-202ENST00000564124 MROH2BQ7Z745 1585 aa19.98■□□□□ 0.79
N4BP1-202ENST00000564124 EIF4G1Q04637 1599 aaKnown RBP19.95■□□□□ 0.78
N4BP1-202ENST00000564124 MIER1Q8N108 512 aa19.95■□□□□ 0.78
N4BP1-202ENST00000564124 WIZO95785 1651 aa19.92■□□□□ 0.78
N4BP1-202ENST00000564124 CEP162Q5TB80 1403 aa19.89■□□□□ 0.77
N4BP1-202ENST00000564124 CCDC88BA6NC98 1476 aa19.79■□□□□ 0.76
N4BP1-202ENST00000564124 ABCC8Q09428 1581 aa19.78■□□□□ 0.76
N4BP1-202ENST00000564124 BAZ1AQ9NRL2 1556 aaPredicted RBP19.77■□□□□ 0.75
N4BP1-202ENST00000564124 TNIKQ9UKE5 1360 aa19.73■□□□□ 0.75
N4BP1-202ENST00000564124 SOGA1O94964 1423 aa19.71■□□□□ 0.75
N4BP1-202ENST00000564124 NACADO15069 1562 aa19.64■□□□□ 0.73
N4BP1-202ENST00000564124 HNRNPUL2Q1KMD3 747 aaKnown RBP19.63■□□□□ 0.73
N4BP1-202ENST00000564124 RUSC2Q8N2Y8 1516 aa19.62■□□□□ 0.73
N4BP1-202ENST00000564124 SUPT16HQ9Y5B9 1047 aaKnown RBP19.62■□□□□ 0.73
N4BP1-202ENST00000564124 UBTFP17480 764 aaKnown RBP19.57■□□□□ 0.72
N4BP1-202ENST00000564124 CSRNP3Q8WYN3 585 aa19.54■□□□□ 0.72
N4BP1-202ENST00000564124 TSHZ2Q9NRE2 1034 aa19.52■□□□□ 0.72
N4BP1-202ENST00000564124 TOP2AP11388 1531 aaKnown RBP19.5■□□□□ 0.71
N4BP1-202ENST00000564124 GOLGA3Q08378 1498 aa19.5■□□□□ 0.71
N4BP1-202ENST00000564124 EEA1Q15075 1411 aa19.49■□□□□ 0.71
N4BP1-202ENST00000564124 SMARCA2P51531 1590 aa19.48■□□□□ 0.71
N4BP1-202ENST00000564124 CLSPNQ9HAW4 1339 aa19.48■□□□□ 0.71
N4BP1-202ENST00000564124 ANP32EQ9BTT0 268 aa19.47■□□□□ 0.71
N4BP1-202ENST00000564124 BCL11AQ9H165 835 aa19.39■□□□□ 0.69
N4BP1-202ENST00000564124 CLIP1P30622 1438 aa19.35■□□□□ 0.69
N4BP1-202ENST00000564124 VPS8Q8N3P4 1428 aa19.34■□□□□ 0.69
N4BP1-202ENST00000564124 DHX57Q6P158 1386 aaKnown RBP19.32■□□□□ 0.68
N4BP1-202ENST00000564124 SMARCA4P51532 1647 aa19.32■□□□□ 0.68
N4BP1-202ENST00000564124 CEP164Q9UPV0 1460 aa19.29■□□□□ 0.68
N4BP1-202ENST00000564124 KIF21BO75037 1637 aa19.29■□□□□ 0.68
N4BP1-202ENST00000564124 KCNH8Q96L42 1107 aa19.24■□□□□ 0.67
N4BP1-202ENST00000564124 BCANQ96GW7 911 aa19.2■□□□□ 0.66
N4BP1-202ENST00000564124 SYNJ1O43426 1573 aa19.2■□□□□ 0.66
N4BP1-202ENST00000564124 APLP2Q06481 763 aa19.18■□□□□ 0.66
N4BP1-202ENST00000564124 RAPGEF2Q9Y4G8 1499 aa19.17■□□□□ 0.66
N4BP1-202ENST00000564124 RANGAP1P46060 587 aaPredicted RBP19.15■□□□□ 0.66
N4BP1-202ENST00000564124 BAZ1BQ9UIG0 1483 aaKnown RBP19.14■□□□□ 0.65
N4BP1-202ENST00000564124 FKBP8Q14318 412 aa19.09■□□□□ 0.65
N4BP1-202ENST00000564124 KANK4Q5T7N3 995 aaPredicted RBP19.05■□□□□ 0.64
N4BP1-202ENST00000564124 RBM19Q9Y4C8 960 aaKnown RBP19.04■□□□□ 0.64
N4BP1-202ENST00000564124 ARAP1Q96P48 1450 aa19.01■□□□□ 0.63
N4BP1-202ENST00000564124 CUX2O14529 1486 aa19■□□□□ 0.63
N4BP1-202ENST00000564124 RRBP1Q9P2E9 1410 aaKnown RBP18.99■□□□□ 0.63
N4BP1-202ENST00000564124 UNC13AQ9UPW8 1703 aa18.96■□□□□ 0.63
N4BP1-202ENST00000564124 MAPKBP1O60336 1514 aa18.94■□□□□ 0.62
N4BP1-202ENST00000564124 MSH5O43196 834 aa18.93■□□□□ 0.62
N4BP1-202ENST00000564124 ITGAEP38570 1179 aa18.93■□□□□ 0.62
N4BP1-202ENST00000564124 DDX10Q13206 875 aaKnown RBP18.9■□□□□ 0.62
N4BP1-202ENST00000564124 CCNB3Q8WWL7 1395 aa18.87■□□□□ 0.61
N4BP1-202ENST00000564124 WDR97A6NE52 1622 aa18.86■□□□□ 0.61
N4BP1-202ENST00000564124 RAB3GAP2Q9H2M9 1393 aa18.85■□□□□ 0.61
N4BP1-202ENST00000564124 TRIM52Q96A61 297 aa18.84■□□□□ 0.61
N4BP1-202ENST00000564124 NEFLP07196 543 aa18.83■□□□□ 0.61
N4BP1-202ENST00000564124 PEG3Q9GZU2 1588 aa18.83■□□□□ 0.6
N4BP1-202ENST00000564124 ERICH3Q5RHP9 1530 aa18.83■□□□□ 0.6
N4BP1-202ENST00000564124 PPP1R15AO75807 674 aaPredicted RBP18.82■□□□□ 0.6
N4BP1-202ENST00000564124 PRXQ9BXM0 1461 aa18.82■□□□□ 0.6
N4BP1-202ENST00000564124 TOP2BQ02880 1626 aa18.8■□□□□ 0.6
N4BP1-202ENST00000564124 SIN3AQ96ST3 1273 aa18.76■□□□□ 0.59
N4BP1-202ENST00000564124 HIRIP3Q9BW71 556 aaPredicted RBP18.75■□□□□ 0.59
N4BP1-202ENST00000564124 CCER2I3L3R5 266 aa18.71■□□□□ 0.59
N4BP1-202ENST00000564124 BIVM-ERCC5R4GMW8 1640 aa18.71■□□□□ 0.59
N4BP1-202ENST00000564124 ARHGAP35Q9NRY4 1499 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms