Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
AP3S1Q92572 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.52■□□□□ 0.39
AP3S1Q92572 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.52■□□□□ 0.39
AP3S1Q92572 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
AP3S1Q92572 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
AP3S1Q92572 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.52■□□□□ 0.39
AP3S1Q92572 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
AP3S1Q92572 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
AP3S1Q92572 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
AP3S1Q92572 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
AP3S1Q92572 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP3S1Q92572 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP3S1Q92572 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
AP3S1Q92572 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP3S1Q92572 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
AP3S1Q92572 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.51■□□□□ 0.39
AP3S1Q92572 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
AP3S1Q92572 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
AP3S1Q92572 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP3S1Q92572 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.51■□□□□ 0.39
AP3S1Q92572 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP3S1Q92572 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.51■□□□□ 0.39
AP3S1Q92572 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.51■□□□□ 0.39
AP3S1Q92572 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP3S1Q92572 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC17.51■□□□□ 0.39
AP3S1Q92572 AC053503.5-201ENST00000601508 636 ntBASIC17.51■□□□□ 0.39
AP3S1Q92572 AC136469.2-201ENST00000623944 1028 ntBASIC17.51■□□□□ 0.39
AP3S1Q92572 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP3S1Q92572 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP3S1Q92572 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
AP3S1Q92572 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP3S1Q92572 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP3S1Q92572 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP3S1Q92572 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.51■□□□□ 0.39
AP3S1Q92572 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC17.51■□□□□ 0.39
AP3S1Q92572 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP3S1Q92572 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
AP3S1Q92572 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
AP3S1Q92572 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
AP3S1Q92572 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
AP3S1Q92572 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.5■□□□□ 0.39
AP3S1Q92572 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
AP3S1Q92572 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
AP3S1Q92572 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
AP3S1Q92572 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
AP3S1Q92572 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
AP3S1Q92572 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
AP3S1Q92572 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
AP3S1Q92572 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC17.5■□□□□ 0.39
AP3S1Q92572 AC005224.4-201ENST00000583262 1652 ntBASIC17.5■□□□□ 0.39
AP3S1Q92572 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
AP3S1Q92572 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
AP3S1Q92572 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
AP3S1Q92572 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
AP3S1Q92572 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
AP3S1Q92572 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
AP3S1Q92572 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC17.5■□□□□ 0.39
AP3S1Q92572 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
AP3S1Q92572 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
AP3S1Q92572 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
AP3S1Q92572 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP3S1Q92572 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.49■□□□□ 0.39
AP3S1Q92572 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP3S1Q92572 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
AP3S1Q92572 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.49■□□□□ 0.39
AP3S1Q92572 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP3S1Q92572 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
AP3S1Q92572 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP3S1Q92572 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP3S1Q92572 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.49■□□□□ 0.39
AP3S1Q92572 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP3S1Q92572 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP3S1Q92572 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
AP3S1Q92572 AC239859.2-201ENST00000444165 318 ntBASIC17.49■□□□□ 0.39
AP3S1Q92572 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.49■□□□□ 0.39
AP3S1Q92572 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
AP3S1Q92572 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC17.49■□□□□ 0.39
AP3S1Q92572 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC17.49■□□□□ 0.39
AP3S1Q92572 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
AP3S1Q92572 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP3S1Q92572 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
AP3S1Q92572 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP3S1Q92572 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.49■□□□□ 0.39
AP3S1Q92572 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
AP3S1Q92572 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
AP3S1Q92572 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
AP3S1Q92572 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.48■□□□□ 0.39
AP3S1Q92572 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
AP3S1Q92572 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.48■□□□□ 0.39
AP3S1Q92572 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP3S1Q92572 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.48■□□□□ 0.39
AP3S1Q92572 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.48■□□□□ 0.39
AP3S1Q92572 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
AP3S1Q92572 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP3S1Q92572 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP3S1Q92572 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.48■□□□□ 0.39
AP3S1Q92572 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP3S1Q92572 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
AP3S1Q92572 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP3S1Q92572 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms