Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
SRP9P49458 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRP9P49458 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRP9P49458 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRP9P49458 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRP9P49458 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRP9P49458 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
SRP9P49458 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.61■□□□□ 0.41
SRP9P49458 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRP9P49458 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.61■□□□□ 0.41
SRP9P49458 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.6■□□□□ 0.41
SRP9P49458 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SRP9P49458 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
SRP9P49458 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SRP9P49458 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SRP9P49458 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SRP9P49458 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.6■□□□□ 0.41
SRP9P49458 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SRP9P49458 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SRP9P49458 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17.6■□□□□ 0.41
SRP9P49458 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SRP9P49458 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SRP9P49458 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SRP9P49458 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
SRP9P49458 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
SRP9P49458 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SRP9P49458 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SRP9P49458 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.6■□□□□ 0.41
SRP9P49458 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SRP9P49458 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.6■□□□□ 0.41
SRP9P49458 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SRP9P49458 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
SRP9P49458 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SRP9P49458 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SRP9P49458 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
SRP9P49458 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
SRP9P49458 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SRP9P49458 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SRP9P49458 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SRP9P49458 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SRP9P49458 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.59■□□□□ 0.41
SRP9P49458 CDV3P1-201ENST00000471403 739 ntBASIC17.59■□□□□ 0.41
SRP9P49458 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.59■□□□□ 0.41
SRP9P49458 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
SRP9P49458 AL591742.1-201ENST00000604433 565 ntBASIC17.59■□□□□ 0.41
SRP9P49458 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
SRP9P49458 AC073111.5-205ENST00000641717 521 ntBASIC17.59■□□□□ 0.41
SRP9P49458 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SRP9P49458 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.59■□□□□ 0.41
SRP9P49458 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SRP9P49458 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.59■□□□□ 0.41
SRP9P49458 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SRP9P49458 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.59■□□□□ 0.41
SRP9P49458 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
SRP9P49458 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SRP9P49458 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.58■□□□□ 0.41
SRP9P49458 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
SRP9P49458 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
SRP9P49458 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
SRP9P49458 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SRP9P49458 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SRP9P49458 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SRP9P49458 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.58■□□□□ 0.4
SRP9P49458 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
SRP9P49458 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.58■□□□□ 0.4
SRP9P49458 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SRP9P49458 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
SRP9P49458 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SRP9P49458 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SRP9P49458 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SRP9P49458 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
SRP9P49458 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SRP9P49458 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SRP9P49458 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SRP9P49458 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SRP9P49458 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SRP9P49458 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SRP9P49458 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SRP9P49458 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SRP9P49458 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.57■□□□□ 0.4
SRP9P49458 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.57■□□□□ 0.4
SRP9P49458 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.57■□□□□ 0.4
SRP9P49458 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
SRP9P49458 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.57■□□□□ 0.4
SRP9P49458 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SRP9P49458 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.57■□□□□ 0.4
SRP9P49458 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.57■□□□□ 0.4
SRP9P49458 AC026185.1-201ENST00000445748 174 ntBASIC17.57■□□□□ 0.4
SRP9P49458 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.57■□□□□ 0.4
SRP9P49458 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.57■□□□□ 0.4
SRP9P49458 AL162412.1-201ENST00000567129 965 ntBASIC17.57■□□□□ 0.4
SRP9P49458 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.57■□□□□ 0.4
SRP9P49458 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SRP9P49458 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SRP9P49458 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
SRP9P49458 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SRP9P49458 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SRP9P49458 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SRP9P49458 AC005332.7-201ENST00000614046 2005 ntBASIC17.57■□□□□ 0.4
SRP9P49458 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms