Protein–RNA interactions for Protein: O14678

ABCD4, ATP-binding cassette sub-family D member 4, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4O14678 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ABCD4O14678 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ABCD4O14678 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
ABCD4O14678 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
ABCD4O14678 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ABCD4O14678 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.56■□□□□ 0.4
ABCD4O14678 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ABCD4O14678 AIRN-201ENST00000601203 4374 ntBASIC17.56■□□□□ 0.4
ABCD4O14678 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.56■□□□□ 0.4
ABCD4O14678 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC17.56■□□□□ 0.4
ABCD4O14678 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.56■□□□□ 0.4
ABCD4O14678 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ABCD4O14678 KRT17P3-201ENST00000420566 1262 ntBASIC17.56■□□□□ 0.4
ABCD4O14678 GCSHP5-201ENST00000443090 522 ntBASIC17.56■□□□□ 0.4
ABCD4O14678 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.56■□□□□ 0.4
ABCD4O14678 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ABCD4O14678 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.56■□□□□ 0.4
ABCD4O14678 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.56■□□□□ 0.4
ABCD4O14678 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.56■□□□□ 0.4
ABCD4O14678 AC142381.4-202ENST00000563973 229 ntBASIC17.56■□□□□ 0.4
ABCD4O14678 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.56■□□□□ 0.4
ABCD4O14678 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.56■□□□□ 0.4
ABCD4O14678 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
ABCD4O14678 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ABCD4O14678 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ABCD4O14678 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ABCD4O14678 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
ABCD4O14678 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
ABCD4O14678 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ABCD4O14678 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.55■□□□□ 0.4
ABCD4O14678 AC121338.2-201ENST00000622535 1744 ntBASIC17.55■□□□□ 0.4
ABCD4O14678 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ABCD4O14678 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.55■□□□□ 0.4
ABCD4O14678 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
ABCD4O14678 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
ABCD4O14678 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ABCD4O14678 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ABCD4O14678 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.55■□□□□ 0.4
ABCD4O14678 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ABCD4O14678 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.55■□□□□ 0.4
ABCD4O14678 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ABCD4O14678 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ABCD4O14678 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ABCD4O14678 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ABCD4O14678 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ABCD4O14678 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.55■□□□□ 0.4
ABCD4O14678 AC093827.2-201ENST00000512654 315 ntBASIC17.55■□□□□ 0.4
ABCD4O14678 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.55■□□□□ 0.4
ABCD4O14678 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.55■□□□□ 0.4
ABCD4O14678 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ABCD4O14678 AC027702.1-201ENST00000563810 1770 ntBASIC17.55■□□□□ 0.4
ABCD4O14678 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.55■□□□□ 0.4
ABCD4O14678 FEM1AP4-201ENST00000443167 1987 ntBASIC17.55■□□□□ 0.4
ABCD4O14678 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.55■□□□□ 0.4
ABCD4O14678 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ABCD4O14678 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.55■□□□□ 0.4
ABCD4O14678 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ABCD4O14678 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ABCD4O14678 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ABCD4O14678 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ABCD4O14678 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ABCD4O14678 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.54■□□□□ 0.4
ABCD4O14678 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
ABCD4O14678 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
ABCD4O14678 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ABCD4O14678 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ABCD4O14678 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.54■□□□□ 0.4
ABCD4O14678 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ABCD4O14678 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.54■□□□□ 0.4
ABCD4O14678 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ABCD4O14678 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ABCD4O14678 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.54■□□□□ 0.4
ABCD4O14678 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC17.54■□□□□ 0.4
ABCD4O14678 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
ABCD4O14678 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ABCD4O14678 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.54■□□□□ 0.4
ABCD4O14678 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ABCD4O14678 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
ABCD4O14678 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ABCD4O14678 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ABCD4O14678 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
ABCD4O14678 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ABCD4O14678 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ABCD4O14678 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ABCD4O14678 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ABCD4O14678 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ABCD4O14678 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ABCD4O14678 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
ABCD4O14678 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ABCD4O14678 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ABCD4O14678 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ABCD4O14678 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ABCD4O14678 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ABCD4O14678 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ABCD4O14678 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ABCD4O14678 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ABCD4O14678 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ABCD4O14678 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.53■□□□□ 0.4
ABCD4O14678 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
ABCD4O14678 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms