Protein–RNA interactions for Protein: Q9NP91

SLC6A20, Sodium- and chloride-dependent transporter XTRP3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20Q9NP91 AC120498.8-201ENST00000614275 531 ntBASIC19.17■□□□□ 0.66
SLC6A20Q9NP91 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLC6A20Q9NP91 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
SLC6A20Q9NP91 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SLC6A20Q9NP91 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.17■□□□□ 0.66
SLC6A20Q9NP91 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC6A20Q9NP91 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
SLC6A20Q9NP91 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLC6A20Q9NP91 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC6A20Q9NP91 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLC6A20Q9NP91 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC6A20Q9NP91 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC6A20Q9NP91 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.17■□□□□ 0.66
SLC6A20Q9NP91 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC6A20Q9NP91 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
SLC6A20Q9NP91 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC6A20Q9NP91 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC6A20Q9NP91 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.16■□□□□ 0.66
SLC6A20Q9NP91 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SLC6A20Q9NP91 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.16■□□□□ 0.66
SLC6A20Q9NP91 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.16■□□□□ 0.66
SLC6A20Q9NP91 RPS2P52-201ENST00000469610 820 ntBASIC19.16■□□□□ 0.66
SLC6A20Q9NP91 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
SLC6A20Q9NP91 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.16■□□□□ 0.66
SLC6A20Q9NP91 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.16■□□□□ 0.66
SLC6A20Q9NP91 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC6A20Q9NP91 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SLC6A20Q9NP91 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SLC6A20Q9NP91 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SLC6A20Q9NP91 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC6A20Q9NP91 KRT16P6-202ENST00000425692 1426 ntBASIC19.16■□□□□ 0.66
SLC6A20Q9NP91 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SLC6A20Q9NP91 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC6A20Q9NP91 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.15■□□□□ 0.66
SLC6A20Q9NP91 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
SLC6A20Q9NP91 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC6A20Q9NP91 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.15■□□□□ 0.66
SLC6A20Q9NP91 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SLC6A20Q9NP91 AC128676.1-201ENST00000454392 318 ntBASIC19.15■□□□□ 0.66
SLC6A20Q9NP91 AC098590.1-201ENST00000468126 897 ntBASIC19.15■□□□□ 0.66
SLC6A20Q9NP91 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SLC6A20Q9NP91 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.15■□□□□ 0.66
SLC6A20Q9NP91 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.15■□□□□ 0.66
SLC6A20Q9NP91 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.15■□□□□ 0.66
SLC6A20Q9NP91 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.15■□□□□ 0.66
SLC6A20Q9NP91 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.15■□□□□ 0.66
SLC6A20Q9NP91 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.15■□□□□ 0.66
SLC6A20Q9NP91 AC233263.1-201ENST00000578059 224 ntBASIC19.15■□□□□ 0.66
SLC6A20Q9NP91 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.15■□□□□ 0.66
SLC6A20Q9NP91 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SLC6A20Q9NP91 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC6A20Q9NP91 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
SLC6A20Q9NP91 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
SLC6A20Q9NP91 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SLC6A20Q9NP91 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.15■□□□□ 0.66
SLC6A20Q9NP91 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.15■□□□□ 0.66
SLC6A20Q9NP91 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC6A20Q9NP91 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.15■□□□□ 0.66
SLC6A20Q9NP91 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.15■□□□□ 0.66
SLC6A20Q9NP91 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SLC6A20Q9NP91 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.14■□□□□ 0.66
SLC6A20Q9NP91 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SLC6A20Q9NP91 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
SLC6A20Q9NP91 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
SLC6A20Q9NP91 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC6A20Q9NP91 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC6A20Q9NP91 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC6A20Q9NP91 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
SLC6A20Q9NP91 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC6A20Q9NP91 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC6A20Q9NP91 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.14■□□□□ 0.65
SLC6A20Q9NP91 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.14■□□□□ 0.65
SLC6A20Q9NP91 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
SLC6A20Q9NP91 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SLC6A20Q9NP91 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC6A20Q9NP91 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SLC6A20Q9NP91 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SLC6A20Q9NP91 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC6A20Q9NP91 POM121L13P-201ENST00000422362 380 ntBASIC19.14■□□□□ 0.65
SLC6A20Q9NP91 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.14■□□□□ 0.65
SLC6A20Q9NP91 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC6A20Q9NP91 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.14■□□□□ 0.65
SLC6A20Q9NP91 AC093827.2-201ENST00000512654 315 ntBASIC19.14■□□□□ 0.65
SLC6A20Q9NP91 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.14■□□□□ 0.65
SLC6A20Q9NP91 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.14■□□□□ 0.65
SLC6A20Q9NP91 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.14■□□□□ 0.65
SLC6A20Q9NP91 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.14■□□□□ 0.65
SLC6A20Q9NP91 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC6A20Q9NP91 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SLC6A20Q9NP91 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SLC6A20Q9NP91 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.14■□□□□ 0.65
SLC6A20Q9NP91 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC6A20Q9NP91 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SLC6A20Q9NP91 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC6A20Q9NP91 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
SLC6A20Q9NP91 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC6A20Q9NP91 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
SLC6A20Q9NP91 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SLC6A20Q9NP91 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.13■□□□□ 0.65
SLC6A20Q9NP91 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms