Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CROCCP3Q8IVE0 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.05■□□□□ 0.48
CROCCP3Q8IVE0 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CROCCP3Q8IVE0 AC068880.1-201ENST00000507289 2297 ntBASIC18.05■□□□□ 0.48
CROCCP3Q8IVE0 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
CROCCP3Q8IVE0 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CROCCP3Q8IVE0 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CROCCP3Q8IVE0 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CROCCP3Q8IVE0 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CROCCP3Q8IVE0 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CROCCP3Q8IVE0 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CROCCP3Q8IVE0 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CROCCP3Q8IVE0 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CROCCP3Q8IVE0 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.05■□□□□ 0.48
CROCCP3Q8IVE0 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CROCCP3Q8IVE0 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CROCCP3Q8IVE0 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CROCCP3Q8IVE0 AC104581.1-202ENST00000635932 2618 ntBASIC18.04■□□□□ 0.48
CROCCP3Q8IVE0 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.04■□□□□ 0.48
CROCCP3Q8IVE0 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CROCCP3Q8IVE0 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CROCCP3Q8IVE0 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.04■□□□□ 0.48
CROCCP3Q8IVE0 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CROCCP3Q8IVE0 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CROCCP3Q8IVE0 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.04■□□□□ 0.48
CROCCP3Q8IVE0 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CROCCP3Q8IVE0 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CROCCP3Q8IVE0 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.04■□□□□ 0.48
CROCCP3Q8IVE0 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CROCCP3Q8IVE0 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
CROCCP3Q8IVE0 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CROCCP3Q8IVE0 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CROCCP3Q8IVE0 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.04■□□□□ 0.48
CROCCP3Q8IVE0 KRT125P-201ENST00000546827 989 ntBASIC18.04■□□□□ 0.48
CROCCP3Q8IVE0 AC010997.5-201ENST00000609182 354 ntBASIC18.04■□□□□ 0.48
CROCCP3Q8IVE0 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CROCCP3Q8IVE0 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CROCCP3Q8IVE0 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CROCCP3Q8IVE0 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.04■□□□□ 0.48
CROCCP3Q8IVE0 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CROCCP3Q8IVE0 KRT8P33-201ENST00000508125 1423 ntBASIC18.04■□□□□ 0.48
CROCCP3Q8IVE0 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.04■□□□□ 0.48
CROCCP3Q8IVE0 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.04■□□□□ 0.48
CROCCP3Q8IVE0 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.04■□□□□ 0.48
CROCCP3Q8IVE0 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CROCCP3Q8IVE0 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CROCCP3Q8IVE0 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.03■□□□□ 0.48
CROCCP3Q8IVE0 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CROCCP3Q8IVE0 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CROCCP3Q8IVE0 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CROCCP3Q8IVE0 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CROCCP3Q8IVE0 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CROCCP3Q8IVE0 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
CROCCP3Q8IVE0 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.03■□□□□ 0.48
CROCCP3Q8IVE0 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CROCCP3Q8IVE0 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CROCCP3Q8IVE0 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.03■□□□□ 0.48
CROCCP3Q8IVE0 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CROCCP3Q8IVE0 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CROCCP3Q8IVE0 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CROCCP3Q8IVE0 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CROCCP3Q8IVE0 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CROCCP3Q8IVE0 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CROCCP3Q8IVE0 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CROCCP3Q8IVE0 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.02■□□□□ 0.48
CROCCP3Q8IVE0 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.02■□□□□ 0.48
CROCCP3Q8IVE0 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CROCCP3Q8IVE0 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CROCCP3Q8IVE0 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CROCCP3Q8IVE0 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.02■□□□□ 0.48
CROCCP3Q8IVE0 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CROCCP3Q8IVE0 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
CROCCP3Q8IVE0 CROCCP3-202ENST00000420820 1947 ntBASIC18.02■□□□□ 0.48
CROCCP3Q8IVE0 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
CROCCP3Q8IVE0 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.02■□□□□ 0.48
CROCCP3Q8IVE0 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CROCCP3Q8IVE0 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CROCCP3Q8IVE0 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CROCCP3Q8IVE0 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.02■□□□□ 0.48
CROCCP3Q8IVE0 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.02■□□□□ 0.48
CROCCP3Q8IVE0 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC18.02■□□□□ 0.48
CROCCP3Q8IVE0 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
CROCCP3Q8IVE0 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
CROCCP3Q8IVE0 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.02■□□□□ 0.47
CROCCP3Q8IVE0 MKRN4P-201ENST00000444706 1521 ntBASIC18.02■□□□□ 0.47
CROCCP3Q8IVE0 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
CROCCP3Q8IVE0 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CROCCP3Q8IVE0 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
CROCCP3Q8IVE0 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.02■□□□□ 0.47
CROCCP3Q8IVE0 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CROCCP3Q8IVE0 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CROCCP3Q8IVE0 TREX1-205ENST00000625293 1783 ntBASIC18.02■□□□□ 0.47
CROCCP3Q8IVE0 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.01■□□□□ 0.47
CROCCP3Q8IVE0 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
CROCCP3Q8IVE0 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CROCCP3Q8IVE0 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CROCCP3Q8IVE0 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
CROCCP3Q8IVE0 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CROCCP3Q8IVE0 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
CROCCP3Q8IVE0 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms