Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
DCLRE1AQ6PJP8 LINC01023-201ENST00000606054 436 ntBASIC21.35■■□□□ 1.01
DCLRE1AQ6PJP8 AC004264.1-201ENST00000608354 794 ntBASIC21.35■■□□□ 1.01
DCLRE1AQ6PJP8 AC113410.3-201ENST00000623366 203 ntBASIC21.35■■□□□ 1.01
DCLRE1AQ6PJP8 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.35■■□□□ 1.01
DCLRE1AQ6PJP8 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.35■■□□□ 1.01
DCLRE1AQ6PJP8 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.35■■□□□ 1.01
DCLRE1AQ6PJP8 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
DCLRE1AQ6PJP8 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
DCLRE1AQ6PJP8 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
DCLRE1AQ6PJP8 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.34■■□□□ 1.01
DCLRE1AQ6PJP8 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.34■■□□□ 1.01
DCLRE1AQ6PJP8 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
DCLRE1AQ6PJP8 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
DCLRE1AQ6PJP8 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC21.34■■□□□ 1.01
DCLRE1AQ6PJP8 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC21.34■■□□□ 1.01
DCLRE1AQ6PJP8 AC010331.1-201ENST00000611423 582 ntBASIC21.34■■□□□ 1.01
DCLRE1AQ6PJP8 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
DCLRE1AQ6PJP8 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.34■■□□□ 1.01
DCLRE1AQ6PJP8 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
DCLRE1AQ6PJP8 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
DCLRE1AQ6PJP8 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
DCLRE1AQ6PJP8 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
DCLRE1AQ6PJP8 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
DCLRE1AQ6PJP8 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
DCLRE1AQ6PJP8 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.34■■□□□ 1.01
DCLRE1AQ6PJP8 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
DCLRE1AQ6PJP8 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
DCLRE1AQ6PJP8 HTR7P1-201ENST00000538670 1336 ntBASIC21.33■■□□□ 1.01
DCLRE1AQ6PJP8 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC21.33■■□□□ 1.01
DCLRE1AQ6PJP8 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
DCLRE1AQ6PJP8 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
DCLRE1AQ6PJP8 KRT16P6-202ENST00000425692 1426 ntBASIC21.33■■□□□ 1.01
DCLRE1AQ6PJP8 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
DCLRE1AQ6PJP8 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
DCLRE1AQ6PJP8 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
DCLRE1AQ6PJP8 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC21.33■■□□□ 1.01
DCLRE1AQ6PJP8 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
DCLRE1AQ6PJP8 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
DCLRE1AQ6PJP8 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
DCLRE1AQ6PJP8 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21.33■■□□□ 1.01
DCLRE1AQ6PJP8 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC21.33■■□□□ 1.01
DCLRE1AQ6PJP8 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC21.33■■□□□ 1.01
DCLRE1AQ6PJP8 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
DCLRE1AQ6PJP8 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.33■■□□□ 1.01
DCLRE1AQ6PJP8 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.33■■□□□ 1
DCLRE1AQ6PJP8 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1
DCLRE1AQ6PJP8 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.33■■□□□ 1
DCLRE1AQ6PJP8 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.33■■□□□ 1
DCLRE1AQ6PJP8 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
DCLRE1AQ6PJP8 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.32■■□□□ 1
DCLRE1AQ6PJP8 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
DCLRE1AQ6PJP8 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
DCLRE1AQ6PJP8 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC21.32■■□□□ 1
DCLRE1AQ6PJP8 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC21.32■■□□□ 1
DCLRE1AQ6PJP8 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
DCLRE1AQ6PJP8 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
DCLRE1AQ6PJP8 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
DCLRE1AQ6PJP8 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
DCLRE1AQ6PJP8 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC21.32■■□□□ 1
DCLRE1AQ6PJP8 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC21.32■■□□□ 1
DCLRE1AQ6PJP8 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC21.32■■□□□ 1
DCLRE1AQ6PJP8 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
DCLRE1AQ6PJP8 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.32■■□□□ 1
DCLRE1AQ6PJP8 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.32■■□□□ 1
DCLRE1AQ6PJP8 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
DCLRE1AQ6PJP8 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DCLRE1AQ6PJP8 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.31■■□□□ 1
DCLRE1AQ6PJP8 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
DCLRE1AQ6PJP8 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
DCLRE1AQ6PJP8 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
DCLRE1AQ6PJP8 AL353807.1-201ENST00000427475 662 ntBASIC21.31■■□□□ 1
DCLRE1AQ6PJP8 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.31■■□□□ 1
DCLRE1AQ6PJP8 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC21.31■■□□□ 1
DCLRE1AQ6PJP8 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC21.31■■□□□ 1
DCLRE1AQ6PJP8 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC21.31■■□□□ 1
DCLRE1AQ6PJP8 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC21.31■■□□□ 1
DCLRE1AQ6PJP8 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC21.31■■□□□ 1
DCLRE1AQ6PJP8 AF186192.3-201ENST00000583427 947 ntBASIC21.31■■□□□ 1
DCLRE1AQ6PJP8 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC21.31■■□□□ 1
DCLRE1AQ6PJP8 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC21.31■■□□□ 1
DCLRE1AQ6PJP8 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.31■■□□□ 1
DCLRE1AQ6PJP8 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DCLRE1AQ6PJP8 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DCLRE1AQ6PJP8 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
DCLRE1AQ6PJP8 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
DCLRE1AQ6PJP8 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
DCLRE1AQ6PJP8 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
DCLRE1AQ6PJP8 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
DCLRE1AQ6PJP8 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
DCLRE1AQ6PJP8 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.3■■□□□ 1
DCLRE1AQ6PJP8 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
DCLRE1AQ6PJP8 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
DCLRE1AQ6PJP8 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.3■■□□□ 1
DCLRE1AQ6PJP8 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
DCLRE1AQ6PJP8 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC21.3■■□□□ 1
DCLRE1AQ6PJP8 SAPCD2P4-201ENST00000424595 1171 ntBASIC21.3■■□□□ 1
DCLRE1AQ6PJP8 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
DCLRE1AQ6PJP8 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC21.3■■□□□ 1
DCLRE1AQ6PJP8 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms