Protein–RNA interactions for Protein: Q2M2E3

ODF4, Outer dense fiber protein 4, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF4Q2M2E3 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ODF4Q2M2E3 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
ODF4Q2M2E3 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
ODF4Q2M2E3 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ODF4Q2M2E3 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
ODF4Q2M2E3 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.61■□□□□ 0.41
ODF4Q2M2E3 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ODF4Q2M2E3 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.61■□□□□ 0.41
ODF4Q2M2E3 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ODF4Q2M2E3 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ODF4Q2M2E3 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ODF4Q2M2E3 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.6■□□□□ 0.41
ODF4Q2M2E3 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
ODF4Q2M2E3 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
ODF4Q2M2E3 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17.6■□□□□ 0.41
ODF4Q2M2E3 ZNRF2P3-201ENST00000424200 374 ntBASIC17.6■□□□□ 0.41
ODF4Q2M2E3 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC17.6■□□□□ 0.41
ODF4Q2M2E3 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC17.6■□□□□ 0.41
ODF4Q2M2E3 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ODF4Q2M2E3 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
ODF4Q2M2E3 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ODF4Q2M2E3 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
ODF4Q2M2E3 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
ODF4Q2M2E3 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.6■□□□□ 0.41
ODF4Q2M2E3 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ODF4Q2M2E3 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ODF4Q2M2E3 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.6■□□□□ 0.41
ODF4Q2M2E3 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ODF4Q2M2E3 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ODF4Q2M2E3 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
ODF4Q2M2E3 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
ODF4Q2M2E3 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ODF4Q2M2E3 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ODF4Q2M2E3 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.59■□□□□ 0.41
ODF4Q2M2E3 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
ODF4Q2M2E3 BX119927.1-201ENST00000636596 1552 ntBASIC17.59■□□□□ 0.41
ODF4Q2M2E3 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
ODF4Q2M2E3 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ODF4Q2M2E3 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
ODF4Q2M2E3 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.59■□□□□ 0.41
ODF4Q2M2E3 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ODF4Q2M2E3 KRT19P1-201ENST00000405746 1186 ntBASIC17.59■□□□□ 0.41
ODF4Q2M2E3 LGR4-203ENST00000480977 492 ntTSL 2 BASIC17.59■□□□□ 0.41
ODF4Q2M2E3 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC17.59■□□□□ 0.41
ODF4Q2M2E3 KRT18P61-201ENST00000585825 1298 ntBASIC17.59■□□□□ 0.41
ODF4Q2M2E3 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ODF4Q2M2E3 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
ODF4Q2M2E3 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ODF4Q2M2E3 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ODF4Q2M2E3 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ODF4Q2M2E3 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.59■□□□□ 0.41
ODF4Q2M2E3 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
ODF4Q2M2E3 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
ODF4Q2M2E3 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.58■□□□□ 0.41
ODF4Q2M2E3 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.58■□□□□ 0.41
ODF4Q2M2E3 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
ODF4Q2M2E3 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
ODF4Q2M2E3 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ODF4Q2M2E3 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
ODF4Q2M2E3 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ODF4Q2M2E3 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ODF4Q2M2E3 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.58■□□□□ 0.4
ODF4Q2M2E3 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ODF4Q2M2E3 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.58■□□□□ 0.4
ODF4Q2M2E3 SLC7A5P1-201ENST00000568957 537 ntBASIC17.58■□□□□ 0.4
ODF4Q2M2E3 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.58■□□□□ 0.4
ODF4Q2M2E3 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ODF4Q2M2E3 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ODF4Q2M2E3 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
ODF4Q2M2E3 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.58■□□□□ 0.4
ODF4Q2M2E3 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ODF4Q2M2E3 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ODF4Q2M2E3 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.58■□□□□ 0.4
ODF4Q2M2E3 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ODF4Q2M2E3 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
ODF4Q2M2E3 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
ODF4Q2M2E3 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ODF4Q2M2E3 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ODF4Q2M2E3 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ODF4Q2M2E3 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ODF4Q2M2E3 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ODF4Q2M2E3 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.57■□□□□ 0.4
ODF4Q2M2E3 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ODF4Q2M2E3 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
ODF4Q2M2E3 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.57■□□□□ 0.4
ODF4Q2M2E3 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.57■□□□□ 0.4
ODF4Q2M2E3 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
ODF4Q2M2E3 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
ODF4Q2M2E3 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC17.57■□□□□ 0.4
ODF4Q2M2E3 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ODF4Q2M2E3 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ODF4Q2M2E3 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.57■□□□□ 0.4
ODF4Q2M2E3 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ODF4Q2M2E3 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ODF4Q2M2E3 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.56■□□□□ 0.4
ODF4Q2M2E3 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.56■□□□□ 0.4
ODF4Q2M2E3 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.56■□□□□ 0.4
ODF4Q2M2E3 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
ODF4Q2M2E3 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.56■□□□□ 0.4
ODF4Q2M2E3 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms