Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB38P57729 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB38P57729 RPS2P52-201ENST00000469610 820 ntBASIC18.77■□□□□ 0.6
RAB38P57729 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RAB38P57729 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.77■□□□□ 0.6
RAB38P57729 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.77■□□□□ 0.6
RAB38P57729 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB38P57729 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB38P57729 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.77■□□□□ 0.6
RAB38P57729 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
RAB38P57729 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RAB38P57729 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RAB38P57729 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
RAB38P57729 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
RAB38P57729 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RAB38P57729 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RAB38P57729 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.76■□□□□ 0.59
RAB38P57729 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB38P57729 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB38P57729 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RAB38P57729 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB38P57729 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB38P57729 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.76■□□□□ 0.59
RAB38P57729 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB38P57729 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB38P57729 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB38P57729 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB38P57729 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RAB38P57729 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.76■□□□□ 0.59
RAB38P57729 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB38P57729 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RAB38P57729 POM121L13P-201ENST00000422362 380 ntBASIC18.76■□□□□ 0.59
RAB38P57729 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.76■□□□□ 0.59
RAB38P57729 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RAB38P57729 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.76■□□□□ 0.59
RAB38P57729 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.76■□□□□ 0.59
RAB38P57729 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.76■□□□□ 0.59
RAB38P57729 AL391422.3-201ENST00000603791 2761 ntBASIC18.76■□□□□ 0.59
RAB38P57729 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RAB38P57729 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB38P57729 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
RAB38P57729 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RAB38P57729 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.75■□□□□ 0.59
RAB38P57729 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB38P57729 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB38P57729 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.75■□□□□ 0.59
RAB38P57729 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB38P57729 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.75■□□□□ 0.59
RAB38P57729 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
RAB38P57729 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RAB38P57729 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.75■□□□□ 0.59
RAB38P57729 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB38P57729 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.75■□□□□ 0.59
RAB38P57729 POU5F1P3-201ENST00000428824 1078 ntBASIC18.75■□□□□ 0.59
RAB38P57729 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.75■□□□□ 0.59
RAB38P57729 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.75■□□□□ 0.59
RAB38P57729 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.75■□□□□ 0.59
RAB38P57729 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB38P57729 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RAB38P57729 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB38P57729 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB38P57729 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.74■□□□□ 0.59
RAB38P57729 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB38P57729 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
RAB38P57729 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RAB38P57729 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB38P57729 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.74■□□□□ 0.59
RAB38P57729 KRT17P3-201ENST00000420566 1262 ntBASIC18.74■□□□□ 0.59
RAB38P57729 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.74■□□□□ 0.59
RAB38P57729 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.74■□□□□ 0.59
RAB38P57729 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.74■□□□□ 0.59
RAB38P57729 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.74■□□□□ 0.59
RAB38P57729 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.74■□□□□ 0.59
RAB38P57729 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.74■□□□□ 0.59
RAB38P57729 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RAB38P57729 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB38P57729 AC124283.5-201ENST00000624661 1809 ntBASIC18.74■□□□□ 0.59
RAB38P57729 PHGDH-210ENST00000641115 1638 ntBASIC18.74■□□□□ 0.59
RAB38P57729 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RAB38P57729 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.73■□□□□ 0.59
RAB38P57729 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB38P57729 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB38P57729 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RAB38P57729 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
RAB38P57729 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.73■□□□□ 0.59
RAB38P57729 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.73■□□□□ 0.59
RAB38P57729 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.73■□□□□ 0.59
RAB38P57729 TSPY20P-201ENST00000450910 630 ntBASIC18.73■□□□□ 0.59
RAB38P57729 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.73■□□□□ 0.59
RAB38P57729 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RAB38P57729 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RAB38P57729 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
RAB38P57729 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB38P57729 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RAB38P57729 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB38P57729 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.73■□□□□ 0.59
RAB38P57729 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB38P57729 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
RAB38P57729 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RAB38P57729 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms