Protein–RNA interactions for Protein: P48443

RXRG, Retinoic acid receptor RXR-gamma, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRGP48443 KRT17P2-201ENST00000300992 1314 ntBASIC19.94■□□□□ 0.78
RXRGP48443 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RXRGP48443 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
RXRGP48443 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RXRGP48443 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.93■□□□□ 0.78
RXRGP48443 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RXRGP48443 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.93■□□□□ 0.78
RXRGP48443 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RXRGP48443 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.93■□□□□ 0.78
RXRGP48443 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RXRGP48443 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.93■□□□□ 0.78
RXRGP48443 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
RXRGP48443 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RXRGP48443 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.93■□□□□ 0.78
RXRGP48443 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
RXRGP48443 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RXRGP48443 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RXRGP48443 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RXRGP48443 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
RXRGP48443 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RXRGP48443 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
RXRGP48443 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RXRGP48443 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.92■□□□□ 0.78
RXRGP48443 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RXRGP48443 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RXRGP48443 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RXRGP48443 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RXRGP48443 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RXRGP48443 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.92■□□□□ 0.78
RXRGP48443 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RXRGP48443 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RXRGP48443 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
RXRGP48443 AC211429.1-201ENST00000415277 523 ntBASIC19.92■□□□□ 0.78
RXRGP48443 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RXRGP48443 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.92■□□□□ 0.78
RXRGP48443 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.92■□□□□ 0.78
RXRGP48443 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RXRGP48443 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RXRGP48443 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
RXRGP48443 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RXRGP48443 AL049637.2-201ENST00000641778 930 ntBASIC19.92■□□□□ 0.78
RXRGP48443 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RXRGP48443 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RXRGP48443 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.92■□□□□ 0.78
RXRGP48443 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RXRGP48443 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
RXRGP48443 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
RXRGP48443 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.92■□□□□ 0.78
RXRGP48443 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RXRGP48443 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.91■□□□□ 0.78
RXRGP48443 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.91■□□□□ 0.78
RXRGP48443 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
RXRGP48443 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.91■□□□□ 0.78
RXRGP48443 ECEL1P3-201ENST00000427961 737 ntBASIC19.91■□□□□ 0.78
RXRGP48443 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
RXRGP48443 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.91■□□□□ 0.78
RXRGP48443 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.91■□□□□ 0.78
RXRGP48443 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
RXRGP48443 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.91■□□□□ 0.78
RXRGP48443 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.91■□□□□ 0.78
RXRGP48443 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RXRGP48443 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
RXRGP48443 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
RXRGP48443 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.91■□□□□ 0.78
RXRGP48443 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.91■□□□□ 0.78
RXRGP48443 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RXRGP48443 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RXRGP48443 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.9■□□□□ 0.78
RXRGP48443 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.9■□□□□ 0.78
RXRGP48443 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RXRGP48443 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.9■□□□□ 0.78
RXRGP48443 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RXRGP48443 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.9■□□□□ 0.78
RXRGP48443 KRASP1-201ENST00000407852 552 ntBASIC19.9■□□□□ 0.78
RXRGP48443 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RXRGP48443 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RXRGP48443 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.9■□□□□ 0.78
RXRGP48443 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.9■□□□□ 0.78
RXRGP48443 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.9■□□□□ 0.78
RXRGP48443 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.9■□□□□ 0.78
RXRGP48443 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.9■□□□□ 0.78
RXRGP48443 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.9■□□□□ 0.78
RXRGP48443 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.9■□□□□ 0.78
RXRGP48443 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.9■□□□□ 0.78
RXRGP48443 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.9■□□□□ 0.78
RXRGP48443 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
RXRGP48443 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RXRGP48443 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.89■□□□□ 0.78
RXRGP48443 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.78
RXRGP48443 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RXRGP48443 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RXRGP48443 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.77
RXRGP48443 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
RXRGP48443 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
RXRGP48443 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.89■□□□□ 0.77
RXRGP48443 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
RXRGP48443 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RXRGP48443 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RXRGP48443 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RXRGP48443 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms