Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTNSO60931 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CTNSO60931 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CTNSO60931 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTNSO60931 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
CTNSO60931 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CTNSO60931 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
CTNSO60931 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CTNSO60931 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
CTNSO60931 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTNSO60931 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.7■□□□□ 0.58
CTNSO60931 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CTNSO60931 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CTNSO60931 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTNSO60931 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTNSO60931 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.7■□□□□ 0.58
CTNSO60931 POM121L13P-201ENST00000422362 380 ntBASIC18.7■□□□□ 0.58
CTNSO60931 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CTNSO60931 RPS2P52-201ENST00000469610 820 ntBASIC18.7■□□□□ 0.58
CTNSO60931 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CTNSO60931 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTNSO60931 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.7■□□□□ 0.58
CTNSO60931 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.7■□□□□ 0.58
CTNSO60931 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.7■□□□□ 0.58
CTNSO60931 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTNSO60931 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CTNSO60931 AC099778.1-201ENST00000568593 1911 ntBASIC18.7■□□□□ 0.58
CTNSO60931 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CTNSO60931 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.7■□□□□ 0.58
CTNSO60931 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTNSO60931 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.69■□□□□ 0.58
CTNSO60931 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CTNSO60931 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CTNSO60931 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.69■□□□□ 0.58
CTNSO60931 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTNSO60931 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTNSO60931 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTNSO60931 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CTNSO60931 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.69■□□□□ 0.58
CTNSO60931 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CTNSO60931 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTNSO60931 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.69■□□□□ 0.58
CTNSO60931 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.69■□□□□ 0.58
CTNSO60931 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CTNSO60931 POU5F1P3-201ENST00000428824 1078 ntBASIC18.69■□□□□ 0.58
CTNSO60931 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CTNSO60931 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.69■□□□□ 0.58
CTNSO60931 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.69■□□□□ 0.58
CTNSO60931 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.69■□□□□ 0.58
CTNSO60931 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.69■□□□□ 0.58
CTNSO60931 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.69■□□□□ 0.58
CTNSO60931 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.69■□□□□ 0.58
CTNSO60931 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.69■□□□□ 0.58
CTNSO60931 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.69■□□□□ 0.58
CTNSO60931 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTNSO60931 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTNSO60931 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.69■□□□□ 0.58
CTNSO60931 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CTNSO60931 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
CTNSO60931 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTNSO60931 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTNSO60931 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTNSO60931 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTNSO60931 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTNSO60931 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CTNSO60931 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.68■□□□□ 0.58
CTNSO60931 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTNSO60931 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.68■□□□□ 0.58
CTNSO60931 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CTNSO60931 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTNSO60931 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTNSO60931 KRT17P3-201ENST00000420566 1262 ntBASIC18.68■□□□□ 0.58
CTNSO60931 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.68■□□□□ 0.58
CTNSO60931 TSPY20P-201ENST00000450910 630 ntBASIC18.68■□□□□ 0.58
CTNSO60931 FAM201B-201ENST00000458407 597 ntBASIC18.68■□□□□ 0.58
CTNSO60931 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.68■□□□□ 0.58
CTNSO60931 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.68■□□□□ 0.58
CTNSO60931 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.68■□□□□ 0.58
CTNSO60931 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CTNSO60931 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.68■□□□□ 0.58
CTNSO60931 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTNSO60931 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.68■□□□□ 0.58
CTNSO60931 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CTNSO60931 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTNSO60931 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTNSO60931 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.68■□□□□ 0.58
CTNSO60931 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTNSO60931 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CTNSO60931 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CTNSO60931 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CTNSO60931 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CTNSO60931 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTNSO60931 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTNSO60931 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTNSO60931 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTNSO60931 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.67■□□□□ 0.58
CTNSO60931 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.67■□□□□ 0.58
CTNSO60931 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTNSO60931 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTNSO60931 AL391422.3-201ENST00000603791 2761 ntBASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms