Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.84■□□□□ 0.61
URB1O60287 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
URB1O60287 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
URB1O60287 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
URB1O60287 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
URB1O60287 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
URB1O60287 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
URB1O60287 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC18.84■□□□□ 0.61
URB1O60287 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
URB1O60287 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.84■□□□□ 0.61
URB1O60287 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.84■□□□□ 0.61
URB1O60287 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.83■□□□□ 0.61
URB1O60287 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
URB1O60287 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.83■□□□□ 0.61
URB1O60287 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
URB1O60287 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
URB1O60287 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
URB1O60287 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.83■□□□□ 0.61
URB1O60287 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
URB1O60287 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.83■□□□□ 0.61
URB1O60287 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.83■□□□□ 0.61
URB1O60287 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
URB1O60287 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.83■□□□□ 0.61
URB1O60287 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
URB1O60287 HCG4P8-203ENST00000443049 980 ntBASIC18.83■□□□□ 0.61
URB1O60287 AL031985.4-201ENST00000642138 673 ntBASIC18.83■□□□□ 0.61
URB1O60287 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.83■□□□□ 0.6
URB1O60287 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
URB1O60287 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.83■□□□□ 0.6
URB1O60287 RNF152P1-201ENST00000397754 604 ntBASIC18.83■□□□□ 0.6
URB1O60287 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.83■□□□□ 0.6
URB1O60287 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
URB1O60287 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.83■□□□□ 0.6
URB1O60287 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
URB1O60287 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
URB1O60287 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
URB1O60287 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC18.82■□□□□ 0.6
URB1O60287 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
URB1O60287 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
URB1O60287 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
URB1O60287 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
URB1O60287 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.82■□□□□ 0.6
URB1O60287 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
URB1O60287 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.82■□□□□ 0.6
URB1O60287 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
URB1O60287 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.82■□□□□ 0.6
URB1O60287 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.82■□□□□ 0.6
URB1O60287 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
URB1O60287 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
URB1O60287 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
URB1O60287 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
URB1O60287 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
URB1O60287 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
URB1O60287 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.81■□□□□ 0.6
URB1O60287 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
URB1O60287 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
URB1O60287 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
URB1O60287 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
URB1O60287 AC116407.4-201ENST00000623319 1061 ntBASIC18.81■□□□□ 0.6
URB1O60287 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
URB1O60287 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
URB1O60287 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
URB1O60287 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
URB1O60287 YBX1P2-201ENST00000489612 999 ntBASIC18.81■□□□□ 0.6
URB1O60287 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.81■□□□□ 0.6
URB1O60287 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
URB1O60287 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
URB1O60287 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
URB1O60287 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
URB1O60287 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
URB1O60287 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
URB1O60287 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
URB1O60287 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
URB1O60287 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
URB1O60287 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
URB1O60287 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
URB1O60287 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
URB1O60287 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.8■□□□□ 0.6
URB1O60287 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.8■□□□□ 0.6
URB1O60287 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
URB1O60287 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
URB1O60287 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.8■□□□□ 0.6
URB1O60287 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
URB1O60287 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
URB1O60287 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
URB1O60287 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.8■□□□□ 0.6
URB1O60287 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
URB1O60287 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
URB1O60287 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
URB1O60287 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
URB1O60287 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
URB1O60287 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
URB1O60287 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
URB1O60287 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
URB1O60287 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.8■□□□□ 0.6
URB1O60287 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.8■□□□□ 0.6
URB1O60287 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.8■□□□□ 0.6
URB1O60287 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
URB1O60287 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
URB1O60287 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms