Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC13.63□□□□□ -0.23
NDUFA1O15239 AC079140.4-201ENST00000507448 529 ntBASIC13.63□□□□□ -0.23
NDUFA1O15239 AL136967.2-201ENST00000623968 743 ntBASIC13.63□□□□□ -0.23
NDUFA1O15239 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NDUFA1O15239 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC13.63□□□□□ -0.23
NDUFA1O15239 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NDUFA1O15239 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NDUFA1O15239 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
NDUFA1O15239 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
NDUFA1O15239 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NDUFA1O15239 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC13.63□□□□□ -0.23
NDUFA1O15239 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
NDUFA1O15239 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
NDUFA1O15239 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC13.63□□□□□ -0.23
NDUFA1O15239 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NDUFA1O15239 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFA1O15239 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC13.62□□□□□ -0.23
NDUFA1O15239 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFA1O15239 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC13.62□□□□□ -0.23
NDUFA1O15239 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC13.62□□□□□ -0.23
NDUFA1O15239 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC13.62□□□□□ -0.23
NDUFA1O15239 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC13.62□□□□□ -0.23
NDUFA1O15239 KRT87P-202ENST00000534226 1464 ntBASIC13.62□□□□□ -0.23
NDUFA1O15239 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFA1O15239 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC13.62□□□□□ -0.23
NDUFA1O15239 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
NDUFA1O15239 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFA1O15239 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFA1O15239 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFA1O15239 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC13.62□□□□□ -0.23
NDUFA1O15239 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC13.62□□□□□ -0.23
NDUFA1O15239 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFA1O15239 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC13.62□□□□□ -0.23
NDUFA1O15239 AC120498.9-201ENST00000339021 3867 ntBASIC13.62□□□□□ -0.23
NDUFA1O15239 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFA1O15239 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC13.62□□□□□ -0.23
NDUFA1O15239 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFA1O15239 AC061975.6-201ENST00000579045 1553 ntBASIC13.62□□□□□ -0.23
NDUFA1O15239 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFA1O15239 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
NDUFA1O15239 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
NDUFA1O15239 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NDUFA1O15239 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NDUFA1O15239 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NDUFA1O15239 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
NDUFA1O15239 TREX1-205ENST00000625293 1783 ntBASIC13.61□□□□□ -0.23
NDUFA1O15239 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NDUFA1O15239 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NDUFA1O15239 AC245052.3-201ENST00000450182 901 ntBASIC13.61□□□□□ -0.23
NDUFA1O15239 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC13.61□□□□□ -0.23
NDUFA1O15239 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC13.61□□□□□ -0.23
NDUFA1O15239 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NDUFA1O15239 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC13.61□□□□□ -0.23
NDUFA1O15239 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
NDUFA1O15239 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
NDUFA1O15239 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NDUFA1O15239 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
NDUFA1O15239 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
NDUFA1O15239 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NDUFA1O15239 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
NDUFA1O15239 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NDUFA1O15239 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NDUFA1O15239 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
NDUFA1O15239 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NDUFA1O15239 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NDUFA1O15239 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NDUFA1O15239 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
NDUFA1O15239 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NDUFA1O15239 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
NDUFA1O15239 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NDUFA1O15239 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
NDUFA1O15239 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC13.6□□□□□ -0.23
NDUFA1O15239 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NDUFA1O15239 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NDUFA1O15239 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NDUFA1O15239 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NDUFA1O15239 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC13.6□□□□□ -0.23
NDUFA1O15239 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC13.6□□□□□ -0.23
NDUFA1O15239 AC142381.2-201ENST00000566120 298 ntBASIC13.6□□□□□ -0.23
NDUFA1O15239 LETM1P2-201ENST00000597330 2178 ntBASIC13.6□□□□□ -0.23
NDUFA1O15239 TPRG1LP1-201ENST00000598702 760 ntBASIC13.6□□□□□ -0.23
NDUFA1O15239 AL139246.5-201ENST00000606645 996 ntBASIC13.6□□□□□ -0.23
NDUFA1O15239 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC13.6□□□□□ -0.23
NDUFA1O15239 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
NDUFA1O15239 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
NDUFA1O15239 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NDUFA1O15239 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
NDUFA1O15239 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC13.6□□□□□ -0.23
NDUFA1O15239 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NDUFA1O15239 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC13.6□□□□□ -0.23
NDUFA1O15239 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC13.6□□□□□ -0.23
NDUFA1O15239 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
NDUFA1O15239 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NDUFA1O15239 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
NDUFA1O15239 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NDUFA1O15239 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NDUFA1O15239 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
NDUFA1O15239 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NDUFA1O15239 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NDUFA1O15239 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms