Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
HLA-DRB4X5D2U9 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DRB4X5D2U9 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
HLA-DRB4X5D2U9 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DRB4X5D2U9 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DRB4X5D2U9 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DRB4X5D2U9 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC19.35■□□□□ 0.69
HLA-DRB4X5D2U9 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DRB4X5D2U9 AL162393.1-201ENST00000437852 946 ntBASIC19.34■□□□□ 0.69
HLA-DRB4X5D2U9 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DRB4X5D2U9 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC19.34■□□□□ 0.69
HLA-DRB4X5D2U9 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HLA-DRB4X5D2U9 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HLA-DRB4X5D2U9 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HLA-DRB4X5D2U9 NRG1-221ENST00000614767 762 ntTSL 5 BASIC19.33■□□□□ 0.68
HLA-DRB4X5D2U9 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC19.33■□□□□ 0.68
HLA-DRB4X5D2U9 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-DRB4X5D2U9 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-DRB4X5D2U9 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-DRB4X5D2U9 AC108673.1-201ENST00000510422 1159 ntBASIC19.31■□□□□ 0.68
HLA-DRB4X5D2U9 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC19.31■□□□□ 0.68
HLA-DRB4X5D2U9 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
HLA-DRB4X5D2U9 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC19.3■□□□□ 0.68
HLA-DRB4X5D2U9 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-DRB4X5D2U9 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
HLA-DRB4X5D2U9 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
HLA-DRB4X5D2U9 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC19.29■□□□□ 0.68
HLA-DRB4X5D2U9 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HLA-DRB4X5D2U9 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-DRB4X5D2U9 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-DRB4X5D2U9 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC19.28■□□□□ 0.68
HLA-DRB4X5D2U9 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-DRB4X5D2U9 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC19.28■□□□□ 0.68
HLA-DRB4X5D2U9 AC087741.3-201ENST00000624270 1347 ntBASIC19.28■□□□□ 0.68
HLA-DRB4X5D2U9 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-DRB4X5D2U9 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC19.28■□□□□ 0.68
HLA-DRB4X5D2U9 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
HLA-DRB4X5D2U9 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-DRB4X5D2U9 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
HLA-DRB4X5D2U9 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HLA-DRB4X5D2U9 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC19.27■□□□□ 0.68
HLA-DRB4X5D2U9 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HLA-DRB4X5D2U9 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HLA-DRB4X5D2U9 AC127502.1-201ENST00000399971 1502 ntBASIC19.25■□□□□ 0.67
HLA-DRB4X5D2U9 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC19.25■□□□□ 0.67
HLA-DRB4X5D2U9 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC19.25■□□□□ 0.67
HLA-DRB4X5D2U9 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HLA-DRB4X5D2U9 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HLA-DRB4X5D2U9 AC044849.2-201ENST00000606596 710 ntBASIC19.25■□□□□ 0.67
HLA-DRB4X5D2U9 AL139393.2-201ENST00000608721 2025 ntBASIC19.25■□□□□ 0.67
HLA-DRB4X5D2U9 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC19.24■□□□□ 0.67
HLA-DRB4X5D2U9 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-DRB4X5D2U9 MIR6090-201ENST00000622481 60 ntBASIC19.23■□□□□ 0.67
HLA-DRB4X5D2U9 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-DRB4X5D2U9 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-DRB4X5D2U9 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-DRB4X5D2U9 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-DRB4X5D2U9 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HLA-DRB4X5D2U9 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
HLA-DRB4X5D2U9 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HLA-DRB4X5D2U9 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HLA-DRB4X5D2U9 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
HLA-DRB4X5D2U9 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DRB4X5D2U9 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
HLA-DRB4X5D2U9 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DRB4X5D2U9 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DRB4X5D2U9 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC19.21■□□□□ 0.67
HLA-DRB4X5D2U9 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DRB4X5D2U9 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
HLA-DRB4X5D2U9 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
HLA-DRB4X5D2U9 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
HLA-DRB4X5D2U9 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC19.19■□□□□ 0.66
HLA-DRB4X5D2U9 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC19.19■□□□□ 0.66
HLA-DRB4X5D2U9 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DRB4X5D2U9 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DRB4X5D2U9 EI24-212ENST00000615917 1407 ntTSL 2 BASIC19.18■□□□□ 0.66
HLA-DRB4X5D2U9 AP004833.2-201ENST00000532228 1454 ntBASIC19.18■□□□□ 0.66
HLA-DRB4X5D2U9 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DRB4X5D2U9 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC19.18■□□□□ 0.66
HLA-DRB4X5D2U9 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC19.18■□□□□ 0.66
HLA-DRB4X5D2U9 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC19.18■□□□□ 0.66
HLA-DRB4X5D2U9 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC19.17■□□□□ 0.66
HLA-DRB4X5D2U9 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-DRB4X5D2U9 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-DRB4X5D2U9 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-DRB4X5D2U9 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-DRB4X5D2U9 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-DRB4X5D2U9 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
HLA-DRB4X5D2U9 CIB2-204ENST00000557846 934 ntTSL 3 BASIC19.16■□□□□ 0.66
HLA-DRB4X5D2U9 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
HLA-DRB4X5D2U9 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-DRB4X5D2U9 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-DRB4X5D2U9 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-DRB4X5D2U9 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
HLA-DRB4X5D2U9 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DRB4X5D2U9 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
HLA-DRB4X5D2U9 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DRB4X5D2U9 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DRB4X5D2U9 RPS2P35-201ENST00000443417 897 ntBASIC19.14■□□□□ 0.65
HLA-DRB4X5D2U9 BOD1-206ENST00000480951 814 ntTSL 2 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms