Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC26.52■■□□□ 1.84
IFT43Q96FT9 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC26.52■■□□□ 1.84
IFT43Q96FT9 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.84
IFT43Q96FT9 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC26.51■■□□□ 1.83
IFT43Q96FT9 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC26.51■■□□□ 1.83
IFT43Q96FT9 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
IFT43Q96FT9 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
IFT43Q96FT9 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC26.5■■□□□ 1.83
IFT43Q96FT9 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC26.5■■□□□ 1.83
IFT43Q96FT9 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
IFT43Q96FT9 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
IFT43Q96FT9 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC26.5■■□□□ 1.83
IFT43Q96FT9 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
IFT43Q96FT9 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
IFT43Q96FT9 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC26.49■■□□□ 1.83
IFT43Q96FT9 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC26.49■■□□□ 1.83
IFT43Q96FT9 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
IFT43Q96FT9 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.49■■□□□ 1.83
IFT43Q96FT9 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
IFT43Q96FT9 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
IFT43Q96FT9 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
IFT43Q96FT9 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
IFT43Q96FT9 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
IFT43Q96FT9 ZNRF2P2-203ENST00000454624 420 ntBASIC26.48■■□□□ 1.83
IFT43Q96FT9 HGH1-207ENST00000628266 258 ntTSL 5 BASIC26.47■■□□□ 1.83
IFT43Q96FT9 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
IFT43Q96FT9 ABCB10P3-201ENST00000561950 2166 ntBASIC26.47■■□□□ 1.83
IFT43Q96FT9 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
IFT43Q96FT9 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC26.46■■□□□ 1.83
IFT43Q96FT9 PVT1-219ENST00000523427 938 ntTSL 3 BASIC26.46■■□□□ 1.83
IFT43Q96FT9 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.83
IFT43Q96FT9 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC26.45■■□□□ 1.82
IFT43Q96FT9 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.45■■□□□ 1.82
IFT43Q96FT9 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
IFT43Q96FT9 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
IFT43Q96FT9 DUX4L29-201ENST00000425409 679 ntBASIC26.44■■□□□ 1.82
IFT43Q96FT9 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
IFT43Q96FT9 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
IFT43Q96FT9 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC26.43■■□□□ 1.82
IFT43Q96FT9 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
IFT43Q96FT9 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC26.42■■□□□ 1.82
IFT43Q96FT9 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC26.42■■□□□ 1.82
IFT43Q96FT9 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC26.41■■□□□ 1.82
IFT43Q96FT9 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
IFT43Q96FT9 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
IFT43Q96FT9 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
IFT43Q96FT9 AC108673.1-201ENST00000510422 1159 ntBASIC26.41■■□□□ 1.82
IFT43Q96FT9 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
IFT43Q96FT9 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
IFT43Q96FT9 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
IFT43Q96FT9 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
IFT43Q96FT9 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC26.38■■□□□ 1.81
IFT43Q96FT9 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
IFT43Q96FT9 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
IFT43Q96FT9 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
IFT43Q96FT9 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC26.37■■□□□ 1.81
IFT43Q96FT9 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
IFT43Q96FT9 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
IFT43Q96FT9 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
IFT43Q96FT9 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
IFT43Q96FT9 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC26.35■■□□□ 1.81
IFT43Q96FT9 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC26.35■■□□□ 1.81
IFT43Q96FT9 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC26.35■■□□□ 1.81
IFT43Q96FT9 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
IFT43Q96FT9 CIB2-204ENST00000557846 934 ntTSL 3 BASIC26.35■■□□□ 1.81
IFT43Q96FT9 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
IFT43Q96FT9 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
IFT43Q96FT9 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
IFT43Q96FT9 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
IFT43Q96FT9 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC26.34■■□□□ 1.81
IFT43Q96FT9 HLA-V-202ENST00000446817 847 ntBASIC26.34■■□□□ 1.81
IFT43Q96FT9 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
IFT43Q96FT9 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
IFT43Q96FT9 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
IFT43Q96FT9 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC26.32■■□□□ 1.8
IFT43Q96FT9 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
IFT43Q96FT9 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
IFT43Q96FT9 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
IFT43Q96FT9 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
IFT43Q96FT9 MBP-237ENST00000579129 1052 ntTSL 5 BASIC26.31■■□□□ 1.8
IFT43Q96FT9 AC021231.2-201ENST00000594613 730 ntBASIC26.31■■□□□ 1.8
IFT43Q96FT9 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
IFT43Q96FT9 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
IFT43Q96FT9 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
IFT43Q96FT9 MIR6090-201ENST00000622481 60 ntBASIC26.3■■□□□ 1.8
IFT43Q96FT9 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
IFT43Q96FT9 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
IFT43Q96FT9 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
IFT43Q96FT9 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
IFT43Q96FT9 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
IFT43Q96FT9 AC127502.1-201ENST00000399971 1502 ntBASIC26.29■■□□□ 1.8
IFT43Q96FT9 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
IFT43Q96FT9 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC26.28■■□□□ 1.8
IFT43Q96FT9 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
IFT43Q96FT9 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
IFT43Q96FT9 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC26.27■■□□□ 1.8
IFT43Q96FT9 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC26.25■■□□□ 1.79
IFT43Q96FT9 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
IFT43Q96FT9 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC26.25■■□□□ 1.79
IFT43Q96FT9 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms