Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
COMMD1Q8N668 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
COMMD1Q8N668 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
COMMD1Q8N668 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC21.24■□□□□ 0.99
COMMD1Q8N668 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
COMMD1Q8N668 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COMMD1Q8N668 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
COMMD1Q8N668 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COMMD1Q8N668 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
COMMD1Q8N668 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
COMMD1Q8N668 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COMMD1Q8N668 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
COMMD1Q8N668 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
COMMD1Q8N668 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC21.22■□□□□ 0.99
COMMD1Q8N668 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COMMD1Q8N668 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
COMMD1Q8N668 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
COMMD1Q8N668 DENR-202ENST00000455982 1052 ntTSL 5 BASIC21.21■□□□□ 0.99
COMMD1Q8N668 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COMMD1Q8N668 CHML-205ENST00000638160 705 ntTSL 3 BASIC21.21■□□□□ 0.99
COMMD1Q8N668 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
COMMD1Q8N668 MIR3665-201ENST00000578708 105 ntBASIC21.2■□□□□ 0.98
COMMD1Q8N668 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
COMMD1Q8N668 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
COMMD1Q8N668 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
COMMD1Q8N668 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC21.19■□□□□ 0.98
COMMD1Q8N668 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
COMMD1Q8N668 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
COMMD1Q8N668 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COMMD1Q8N668 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
COMMD1Q8N668 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.17■□□□□ 0.98
COMMD1Q8N668 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
COMMD1Q8N668 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
COMMD1Q8N668 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
COMMD1Q8N668 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COMMD1Q8N668 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
COMMD1Q8N668 MIR762-201ENST00000390236 83 ntBASIC21.15■□□□□ 0.98
COMMD1Q8N668 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
COMMD1Q8N668 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COMMD1Q8N668 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COMMD1Q8N668 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COMMD1Q8N668 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
COMMD1Q8N668 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
COMMD1Q8N668 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
COMMD1Q8N668 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
COMMD1Q8N668 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
COMMD1Q8N668 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
COMMD1Q8N668 AL162393.1-201ENST00000437852 946 ntBASIC21.12■□□□□ 0.97
COMMD1Q8N668 RPS2P35-201ENST00000443417 897 ntBASIC21.12■□□□□ 0.97
COMMD1Q8N668 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
COMMD1Q8N668 AC005559.1-201ENST00000589661 871 ntBASIC21.12■□□□□ 0.97
COMMD1Q8N668 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC21.12■□□□□ 0.97
COMMD1Q8N668 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC21.11■□□□□ 0.97
COMMD1Q8N668 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COMMD1Q8N668 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COMMD1Q8N668 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
COMMD1Q8N668 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
COMMD1Q8N668 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC21.11■□□□□ 0.97
COMMD1Q8N668 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COMMD1Q8N668 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
COMMD1Q8N668 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC21.1■□□□□ 0.97
COMMD1Q8N668 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC21.1■□□□□ 0.97
COMMD1Q8N668 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
COMMD1Q8N668 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COMMD1Q8N668 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
COMMD1Q8N668 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
COMMD1Q8N668 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
COMMD1Q8N668 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
COMMD1Q8N668 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
COMMD1Q8N668 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COMMD1Q8N668 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.07■□□□□ 0.96
COMMD1Q8N668 NRG1-221ENST00000614767 762 ntTSL 5 BASIC21.07■□□□□ 0.96
COMMD1Q8N668 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC21.06■□□□□ 0.96
COMMD1Q8N668 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
COMMD1Q8N668 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
COMMD1Q8N668 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
COMMD1Q8N668 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
COMMD1Q8N668 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
COMMD1Q8N668 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
COMMD1Q8N668 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COMMD1Q8N668 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC21.04■□□□□ 0.96
COMMD1Q8N668 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
COMMD1Q8N668 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.04■□□□□ 0.96
COMMD1Q8N668 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
COMMD1Q8N668 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COMMD1Q8N668 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COMMD1Q8N668 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.02■□□□□ 0.96
COMMD1Q8N668 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
COMMD1Q8N668 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COMMD1Q8N668 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC21.02■□□□□ 0.96
COMMD1Q8N668 DUX4L28-201ENST00000623687 678 ntBASIC21.02■□□□□ 0.96
COMMD1Q8N668 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.02■□□□□ 0.96
COMMD1Q8N668 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.02■□□□□ 0.96
COMMD1Q8N668 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
COMMD1Q8N668 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
COMMD1Q8N668 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
COMMD1Q8N668 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COMMD1Q8N668 DRD5P2-201ENST00000421395 2012 ntBASIC21.01■□□□□ 0.95
COMMD1Q8N668 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
COMMD1Q8N668 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms