Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
C11orf42Q8N5U0 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
C11orf42Q8N5U0 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
C11orf42Q8N5U0 CIB2-204ENST00000557846 934 ntTSL 3 BASIC21.41■■□□□ 1.02
C11orf42Q8N5U0 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
C11orf42Q8N5U0 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
C11orf42Q8N5U0 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
C11orf42Q8N5U0 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC21.4■■□□□ 1.02
C11orf42Q8N5U0 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
C11orf42Q8N5U0 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.02
C11orf42Q8N5U0 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
C11orf42Q8N5U0 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC21.39■■□□□ 1.01
C11orf42Q8N5U0 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
C11orf42Q8N5U0 AC127502.1-201ENST00000399971 1502 ntBASIC21.39■■□□□ 1.01
C11orf42Q8N5U0 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
C11orf42Q8N5U0 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
C11orf42Q8N5U0 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
C11orf42Q8N5U0 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
C11orf42Q8N5U0 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
C11orf42Q8N5U0 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
C11orf42Q8N5U0 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
C11orf42Q8N5U0 AC021231.2-201ENST00000594613 730 ntBASIC21.36■■□□□ 1.01
C11orf42Q8N5U0 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
C11orf42Q8N5U0 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
C11orf42Q8N5U0 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
C11orf42Q8N5U0 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
C11orf42Q8N5U0 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC21.35■■□□□ 1.01
C11orf42Q8N5U0 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
C11orf42Q8N5U0 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
C11orf42Q8N5U0 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
C11orf42Q8N5U0 DUX4L29-201ENST00000425409 679 ntBASIC21.34■■□□□ 1.01
C11orf42Q8N5U0 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
C11orf42Q8N5U0 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
C11orf42Q8N5U0 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
C11orf42Q8N5U0 EI24-212ENST00000615917 1407 ntTSL 2 BASIC21.34■■□□□ 1.01
C11orf42Q8N5U0 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
C11orf42Q8N5U0 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21.33■■□□□ 1.01
C11orf42Q8N5U0 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.33■■□□□ 1.01
C11orf42Q8N5U0 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1
C11orf42Q8N5U0 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
C11orf42Q8N5U0 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
C11orf42Q8N5U0 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC21.32■■□□□ 1
C11orf42Q8N5U0 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
C11orf42Q8N5U0 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC21.31■■□□□ 1
C11orf42Q8N5U0 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
C11orf42Q8N5U0 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC21.3■■□□□ 1
C11orf42Q8N5U0 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
C11orf42Q8N5U0 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.3■■□□□ 1
C11orf42Q8N5U0 MLEC-202ENST00000412616 841 ntTSL 3 BASIC21.3■■□□□ 1
C11orf42Q8N5U0 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.3■■□□□ 1
C11orf42Q8N5U0 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.3■■□□□ 1
C11orf42Q8N5U0 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
C11orf42Q8N5U0 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
C11orf42Q8N5U0 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
C11orf42Q8N5U0 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
C11orf42Q8N5U0 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.29■■□□□ 1
C11orf42Q8N5U0 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.29■■□□□ 1
C11orf42Q8N5U0 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.29■■□□□ 1
C11orf42Q8N5U0 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
C11orf42Q8N5U0 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.29■■□□□ 1
C11orf42Q8N5U0 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
C11orf42Q8N5U0 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
C11orf42Q8N5U0 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
C11orf42Q8N5U0 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC21.28■■□□□ 1
C11orf42Q8N5U0 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
C11orf42Q8N5U0 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
C11orf42Q8N5U0 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
C11orf42Q8N5U0 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.27■■□□□ 1
C11orf42Q8N5U0 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
C11orf42Q8N5U0 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
C11orf42Q8N5U0 ABHD17AP4-201ENST00000411545 909 ntBASIC21.27■■□□□ 1
C11orf42Q8N5U0 AL139393.2-201ENST00000608721 2025 ntBASIC21.27■■□□□ 1
C11orf42Q8N5U0 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC21.27■□□□□ 0.99
C11orf42Q8N5U0 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
C11orf42Q8N5U0 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
C11orf42Q8N5U0 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
C11orf42Q8N5U0 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
C11orf42Q8N5U0 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
C11orf42Q8N5U0 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC21.25■□□□□ 0.99
C11orf42Q8N5U0 LINC00273-201ENST00000539813 1452 ntBASIC21.25■□□□□ 0.99
C11orf42Q8N5U0 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21.24■□□□□ 0.99
C11orf42Q8N5U0 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
C11orf42Q8N5U0 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
C11orf42Q8N5U0 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.24■□□□□ 0.99
C11orf42Q8N5U0 ABCB10P3-201ENST00000561950 2166 ntBASIC21.24■□□□□ 0.99
C11orf42Q8N5U0 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
C11orf42Q8N5U0 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
C11orf42Q8N5U0 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
C11orf42Q8N5U0 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
C11orf42Q8N5U0 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC21.23■□□□□ 0.99
C11orf42Q8N5U0 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
C11orf42Q8N5U0 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC21.22■□□□□ 0.99
C11orf42Q8N5U0 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC21.22■□□□□ 0.99
C11orf42Q8N5U0 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
C11orf42Q8N5U0 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
C11orf42Q8N5U0 ZNRF2P2-203ENST00000454624 420 ntBASIC21.21■□□□□ 0.99
C11orf42Q8N5U0 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC21.21■□□□□ 0.99
C11orf42Q8N5U0 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.21■□□□□ 0.99
C11orf42Q8N5U0 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
C11orf42Q8N5U0 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms