Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
C11orf42Q8N5U0 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
C11orf42Q8N5U0 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
C11orf42Q8N5U0 CIB2-204ENST00000557846 934 ntTSL 3 BASIC21.41■■□□□ 1.02
C11orf42Q8N5U0 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
C11orf42Q8N5U0 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
C11orf42Q8N5U0 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
C11orf42Q8N5U0 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC21.4■■□□□ 1.02
C11orf42Q8N5U0 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
C11orf42Q8N5U0 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.02
C11orf42Q8N5U0 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
C11orf42Q8N5U0 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC21.39■■□□□ 1.01
C11orf42Q8N5U0 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
C11orf42Q8N5U0 AC127502.1-201ENST00000399971 1502 ntBASIC21.39■■□□□ 1.01
C11orf42Q8N5U0 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
C11orf42Q8N5U0 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
C11orf42Q8N5U0 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
C11orf42Q8N5U0 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
C11orf42Q8N5U0 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
C11orf42Q8N5U0 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
C11orf42Q8N5U0 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
C11orf42Q8N5U0 AC021231.2-201ENST00000594613 730 ntBASIC21.36■■□□□ 1.01
C11orf42Q8N5U0 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
C11orf42Q8N5U0 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
C11orf42Q8N5U0 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
C11orf42Q8N5U0 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
C11orf42Q8N5U0 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC21.35■■□□□ 1.01
C11orf42Q8N5U0 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
C11orf42Q8N5U0 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
C11orf42Q8N5U0 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
C11orf42Q8N5U0 DUX4L29-201ENST00000425409 679 ntBASIC21.34■■□□□ 1.01
C11orf42Q8N5U0 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
C11orf42Q8N5U0 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
C11orf42Q8N5U0 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
C11orf42Q8N5U0 EI24-212ENST00000615917 1407 ntTSL 2 BASIC21.34■■□□□ 1.01
C11orf42Q8N5U0 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
C11orf42Q8N5U0 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21.33■■□□□ 1.01
C11orf42Q8N5U0 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.33■■□□□ 1.01
C11orf42Q8N5U0 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1
C11orf42Q8N5U0 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
C11orf42Q8N5U0 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
C11orf42Q8N5U0 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC21.32■■□□□ 1
C11orf42Q8N5U0 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
C11orf42Q8N5U0 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC21.31■■□□□ 1
C11orf42Q8N5U0 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
C11orf42Q8N5U0 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC21.3■■□□□ 1
C11orf42Q8N5U0 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
C11orf42Q8N5U0 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.3■■□□□ 1
C11orf42Q8N5U0 MLEC-202ENST00000412616 841 ntTSL 3 BASIC21.3■■□□□ 1
C11orf42Q8N5U0 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.3■■□□□ 1
C11orf42Q8N5U0 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.3■■□□□ 1
C11orf42Q8N5U0 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
C11orf42Q8N5U0 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
C11orf42Q8N5U0 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
C11orf42Q8N5U0 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
C11orf42Q8N5U0 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.29■■□□□ 1
C11orf42Q8N5U0 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.29■■□□□ 1
C11orf42Q8N5U0 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.29■■□□□ 1
C11orf42Q8N5U0 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
C11orf42Q8N5U0 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.29■■□□□ 1
C11orf42Q8N5U0 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
C11orf42Q8N5U0 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
C11orf42Q8N5U0 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
C11orf42Q8N5U0 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC21.28■■□□□ 1
C11orf42Q8N5U0 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
C11orf42Q8N5U0 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
C11orf42Q8N5U0 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
C11orf42Q8N5U0 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.27■■□□□ 1
C11orf42Q8N5U0 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
C11orf42Q8N5U0 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
C11orf42Q8N5U0 ABHD17AP4-201ENST00000411545 909 ntBASIC21.27■■□□□ 1
C11orf42Q8N5U0 AL139393.2-201ENST00000608721 2025 ntBASIC21.27■■□□□ 1
C11orf42Q8N5U0 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC21.27■□□□□ 0.99
C11orf42Q8N5U0 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
C11orf42Q8N5U0 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
C11orf42Q8N5U0 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
C11orf42Q8N5U0 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
C11orf42Q8N5U0 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
C11orf42Q8N5U0 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC21.25■□□□□ 0.99
C11orf42Q8N5U0 LINC00273-201ENST00000539813 1452 ntBASIC21.25■□□□□ 0.99
C11orf42Q8N5U0 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21.24■□□□□ 0.99
C11orf42Q8N5U0 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
C11orf42Q8N5U0 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
C11orf42Q8N5U0 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.24■□□□□ 0.99
C11orf42Q8N5U0 ABCB10P3-201ENST00000561950 2166 ntBASIC21.24■□□□□ 0.99
C11orf42Q8N5U0 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
C11orf42Q8N5U0 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
C11orf42Q8N5U0 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
C11orf42Q8N5U0 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
C11orf42Q8N5U0 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC21.23■□□□□ 0.99
C11orf42Q8N5U0 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
C11orf42Q8N5U0 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC21.22■□□□□ 0.99
C11orf42Q8N5U0 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC21.22■□□□□ 0.99
C11orf42Q8N5U0 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
C11orf42Q8N5U0 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
C11orf42Q8N5U0 ZNRF2P2-203ENST00000454624 420 ntBASIC21.21■□□□□ 0.99
C11orf42Q8N5U0 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC21.21■□□□□ 0.99
C11orf42Q8N5U0 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.21■□□□□ 0.99
C11orf42Q8N5U0 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
C11orf42Q8N5U0 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms