Protein–RNA interactions for Protein: Q86WS4

C12orf40, Uncharacterized protein C12orf40, humanhuman

Predictions only

Length 652 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf40Q86WS4 LINC00273-201ENST00000539813 1452 ntBASIC26.76■■□□□ 1.87
C12orf40Q86WS4 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
C12orf40Q86WS4 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
C12orf40Q86WS4 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC26.75■■□□□ 1.87
C12orf40Q86WS4 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC26.75■■□□□ 1.87
C12orf40Q86WS4 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
C12orf40Q86WS4 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
C12orf40Q86WS4 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC26.74■■□□□ 1.87
C12orf40Q86WS4 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC26.74■■□□□ 1.87
C12orf40Q86WS4 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
C12orf40Q86WS4 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC26.72■■□□□ 1.87
C12orf40Q86WS4 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC26.72■■□□□ 1.87
C12orf40Q86WS4 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC26.72■■□□□ 1.87
C12orf40Q86WS4 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
C12orf40Q86WS4 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC26.72■■□□□ 1.87
C12orf40Q86WS4 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC26.72■■□□□ 1.87
C12orf40Q86WS4 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
C12orf40Q86WS4 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
C12orf40Q86WS4 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC26.71■■□□□ 1.87
C12orf40Q86WS4 HSD17B1P1-201ENST00000590052 955 ntBASIC26.71■■□□□ 1.87
C12orf40Q86WS4 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
C12orf40Q86WS4 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC26.7■■□□□ 1.86
C12orf40Q86WS4 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
C12orf40Q86WS4 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
C12orf40Q86WS4 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
C12orf40Q86WS4 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC26.68■■□□□ 1.86
C12orf40Q86WS4 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
C12orf40Q86WS4 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC26.67■■□□□ 1.86
C12orf40Q86WS4 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC26.67■■□□□ 1.86
C12orf40Q86WS4 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC26.67■■□□□ 1.86
C12orf40Q86WS4 AC127502.1-201ENST00000399971 1502 ntBASIC26.66■■□□□ 1.86
C12orf40Q86WS4 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
C12orf40Q86WS4 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
C12orf40Q86WS4 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
C12orf40Q86WS4 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC26.65■■□□□ 1.86
C12orf40Q86WS4 AL135925.1-201ENST00000605920 1701 ntBASIC26.65■■□□□ 1.86
C12orf40Q86WS4 CHST11-202ENST00000546689 756 ntTSL 2 BASIC26.64■■□□□ 1.86
C12orf40Q86WS4 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
C12orf40Q86WS4 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC26.63■■□□□ 1.85
C12orf40Q86WS4 ABHD17AP3-201ENST00000503096 1137 ntBASIC26.63■■□□□ 1.85
C12orf40Q86WS4 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC26.62■■□□□ 1.85
C12orf40Q86WS4 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
C12orf40Q86WS4 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC26.61■■□□□ 1.85
C12orf40Q86WS4 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
C12orf40Q86WS4 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC26.6■■□□□ 1.85
C12orf40Q86WS4 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
C12orf40Q86WS4 BRD4-212ENST00000630599 726 ntTSL 2 BASIC26.59■■□□□ 1.85
C12orf40Q86WS4 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
C12orf40Q86WS4 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC26.58■■□□□ 1.85
C12orf40Q86WS4 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC26.58■■□□□ 1.85
C12orf40Q86WS4 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC26.57■■□□□ 1.84
C12orf40Q86WS4 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
C12orf40Q86WS4 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
C12orf40Q86WS4 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC26.56■■□□□ 1.84
C12orf40Q86WS4 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
C12orf40Q86WS4 WHAMMP2-203ENST00000563942 1603 ntBASIC26.55■■□□□ 1.84
C12orf40Q86WS4 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC26.55■■□□□ 1.84
C12orf40Q86WS4 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC26.54■■□□□ 1.84
C12orf40Q86WS4 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
C12orf40Q86WS4 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
C12orf40Q86WS4 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
C12orf40Q86WS4 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC26.53■■□□□ 1.84
C12orf40Q86WS4 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
C12orf40Q86WS4 AC135983.2-203ENST00000454486 1613 ntBASIC26.53■■□□□ 1.84
C12orf40Q86WS4 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
C12orf40Q86WS4 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
C12orf40Q86WS4 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
C12orf40Q86WS4 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
C12orf40Q86WS4 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC26.52■■□□□ 1.84
C12orf40Q86WS4 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
C12orf40Q86WS4 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
C12orf40Q86WS4 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
C12orf40Q86WS4 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
C12orf40Q86WS4 SRP68-213ENST00000629930 165 ntTSL 5 BASIC26.52■■□□□ 1.84
C12orf40Q86WS4 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
C12orf40Q86WS4 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
C12orf40Q86WS4 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
C12orf40Q86WS4 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC26.51■■□□□ 1.83
C12orf40Q86WS4 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC26.5■■□□□ 1.83
C12orf40Q86WS4 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC26.5■■□□□ 1.83
C12orf40Q86WS4 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
C12orf40Q86WS4 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
C12orf40Q86WS4 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
C12orf40Q86WS4 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
C12orf40Q86WS4 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC26.48■■□□□ 1.83
C12orf40Q86WS4 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC26.48■■□□□ 1.83
C12orf40Q86WS4 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
C12orf40Q86WS4 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
C12orf40Q86WS4 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
C12orf40Q86WS4 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
C12orf40Q86WS4 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC26.46■■□□□ 1.83
C12orf40Q86WS4 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
C12orf40Q86WS4 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC26.45■■□□□ 1.82
C12orf40Q86WS4 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC26.45■■□□□ 1.82
C12orf40Q86WS4 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
C12orf40Q86WS4 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC26.44■■□□□ 1.82
C12orf40Q86WS4 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC26.44■■□□□ 1.82
C12orf40Q86WS4 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
C12orf40Q86WS4 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
C12orf40Q86WS4 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC26.43■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms