Protein–RNA interactions for Protein: Q53R12

TM4SF20, Transmembrane 4 L6 family member 20, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF20Q53R12 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC19.97■□□□□ 0.79
TM4SF20Q53R12 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC19.97■□□□□ 0.79
TM4SF20Q53R12 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
TM4SF20Q53R12 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
TM4SF20Q53R12 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
TM4SF20Q53R12 AC108673.1-201ENST00000510422 1159 ntBASIC19.96■□□□□ 0.79
TM4SF20Q53R12 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC19.96■□□□□ 0.79
TM4SF20Q53R12 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
TM4SF20Q53R12 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TM4SF20Q53R12 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TM4SF20Q53R12 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TM4SF20Q53R12 AC044849.2-201ENST00000606596 710 ntBASIC19.95■□□□□ 0.78
TM4SF20Q53R12 MIR6090-201ENST00000622481 60 ntBASIC19.95■□□□□ 0.78
TM4SF20Q53R12 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TM4SF20Q53R12 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TM4SF20Q53R12 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC19.94■□□□□ 0.78
TM4SF20Q53R12 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TM4SF20Q53R12 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TM4SF20Q53R12 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TM4SF20Q53R12 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TM4SF20Q53R12 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TM4SF20Q53R12 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TM4SF20Q53R12 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TM4SF20Q53R12 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
TM4SF20Q53R12 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TM4SF20Q53R12 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
TM4SF20Q53R12 ABCB10P3-201ENST00000561950 2166 ntBASIC19.93■□□□□ 0.78
TM4SF20Q53R12 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TM4SF20Q53R12 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TM4SF20Q53R12 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC19.92■□□□□ 0.78
TM4SF20Q53R12 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TM4SF20Q53R12 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TM4SF20Q53R12 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TM4SF20Q53R12 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TM4SF20Q53R12 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TM4SF20Q53R12 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TM4SF20Q53R12 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TM4SF20Q53R12 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC19.9■□□□□ 0.78
TM4SF20Q53R12 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TM4SF20Q53R12 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC19.89■□□□□ 0.77
TM4SF20Q53R12 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TM4SF20Q53R12 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
TM4SF20Q53R12 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TM4SF20Q53R12 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
TM4SF20Q53R12 AC127502.1-201ENST00000399971 1502 ntBASIC19.87■□□□□ 0.77
TM4SF20Q53R12 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
TM4SF20Q53R12 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TM4SF20Q53R12 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TM4SF20Q53R12 BOD1-206ENST00000480951 814 ntTSL 2 BASIC19.87■□□□□ 0.77
TM4SF20Q53R12 CIB2-204ENST00000557846 934 ntTSL 3 BASIC19.87■□□□□ 0.77
TM4SF20Q53R12 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
TM4SF20Q53R12 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TM4SF20Q53R12 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC19.85■□□□□ 0.77
TM4SF20Q53R12 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC19.85■□□□□ 0.77
TM4SF20Q53R12 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TM4SF20Q53R12 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TM4SF20Q53R12 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TM4SF20Q53R12 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC19.83■□□□□ 0.77
TM4SF20Q53R12 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
TM4SF20Q53R12 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
TM4SF20Q53R12 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TM4SF20Q53R12 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TM4SF20Q53R12 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC19.82■□□□□ 0.76
TM4SF20Q53R12 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
TM4SF20Q53R12 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TM4SF20Q53R12 AL139393.2-201ENST00000608721 2025 ntBASIC19.81■□□□□ 0.76
TM4SF20Q53R12 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC19.81■□□□□ 0.76
TM4SF20Q53R12 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TM4SF20Q53R12 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC19.81■□□□□ 0.76
TM4SF20Q53R12 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TM4SF20Q53R12 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.81■□□□□ 0.76
TM4SF20Q53R12 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
TM4SF20Q53R12 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TM4SF20Q53R12 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TM4SF20Q53R12 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
TM4SF20Q53R12 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TM4SF20Q53R12 EI24-212ENST00000615917 1407 ntTSL 2 BASIC19.79■□□□□ 0.76
TM4SF20Q53R12 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TM4SF20Q53R12 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TM4SF20Q53R12 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC19.79■□□□□ 0.76
TM4SF20Q53R12 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC19.78■□□□□ 0.76
TM4SF20Q53R12 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC19.78■□□□□ 0.76
TM4SF20Q53R12 SHF-206ENST00000560471 2499 ntTSL 5 BASIC19.78■□□□□ 0.76
TM4SF20Q53R12 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
TM4SF20Q53R12 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
TM4SF20Q53R12 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
TM4SF20Q53R12 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
TM4SF20Q53R12 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
TM4SF20Q53R12 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
TM4SF20Q53R12 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TM4SF20Q53R12 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TM4SF20Q53R12 DUX4L29-201ENST00000425409 679 ntBASIC19.75■□□□□ 0.75
TM4SF20Q53R12 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TM4SF20Q53R12 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TM4SF20Q53R12 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC19.75■□□□□ 0.75
TM4SF20Q53R12 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TM4SF20Q53R12 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TM4SF20Q53R12 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TM4SF20Q53R12 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TM4SF20Q53R12 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms