Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC31.65■■■□□ 2.66
PDS5AQ29RF7 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
PDS5AQ29RF7 MIR4449-201ENST00000578365 66 ntBASIC31.64■■■□□ 2.66
PDS5AQ29RF7 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC31.64■■■□□ 2.65
PDS5AQ29RF7 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC31.63■■■□□ 2.65
PDS5AQ29RF7 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC31.62■■■□□ 2.65
PDS5AQ29RF7 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC31.62■■■□□ 2.65
PDS5AQ29RF7 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
PDS5AQ29RF7 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
PDS5AQ29RF7 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
PDS5AQ29RF7 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC31.6■■■□□ 2.65
PDS5AQ29RF7 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC31.59■■■□□ 2.65
PDS5AQ29RF7 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC31.59■■■□□ 2.65
PDS5AQ29RF7 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC31.59■■■□□ 2.65
PDS5AQ29RF7 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
PDS5AQ29RF7 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
PDS5AQ29RF7 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC31.58■■■□□ 2.65
PDS5AQ29RF7 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
PDS5AQ29RF7 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
PDS5AQ29RF7 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC31.58■■■□□ 2.65
PDS5AQ29RF7 AC127502.1-201ENST00000399971 1502 ntBASIC31.58■■■□□ 2.65
PDS5AQ29RF7 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.65
PDS5AQ29RF7 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC31.57■■■□□ 2.64
PDS5AQ29RF7 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC31.56■■■□□ 2.64
PDS5AQ29RF7 CHML-204ENST00000638121 920 ntTSL 2 BASIC31.56■■■□□ 2.64
PDS5AQ29RF7 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
PDS5AQ29RF7 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC31.55■■■□□ 2.64
PDS5AQ29RF7 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
PDS5AQ29RF7 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
PDS5AQ29RF7 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
PDS5AQ29RF7 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC31.53■■■□□ 2.64
PDS5AQ29RF7 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC31.52■■■□□ 2.64
PDS5AQ29RF7 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC31.52■■■□□ 2.64
PDS5AQ29RF7 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
PDS5AQ29RF7 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
PDS5AQ29RF7 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC31.5■■■□□ 2.63
PDS5AQ29RF7 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC31.5■■■□□ 2.63
PDS5AQ29RF7 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC31.49■■■□□ 2.63
PDS5AQ29RF7 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
PDS5AQ29RF7 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
PDS5AQ29RF7 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC31.48■■■□□ 2.63
PDS5AQ29RF7 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC31.48■■■□□ 2.63
PDS5AQ29RF7 HES6-205ENST00000409356 528 ntTSL 2 BASIC31.47■■■□□ 2.63
PDS5AQ29RF7 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC31.46■■■□□ 2.63
PDS5AQ29RF7 AC135983.2-203ENST00000454486 1613 ntBASIC31.46■■■□□ 2.63
PDS5AQ29RF7 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC31.46■■■□□ 2.63
PDS5AQ29RF7 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC31.46■■■□□ 2.63
PDS5AQ29RF7 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC31.45■■■□□ 2.62
PDS5AQ29RF7 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
PDS5AQ29RF7 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
PDS5AQ29RF7 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC31.42■■■□□ 2.62
PDS5AQ29RF7 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC31.42■■■□□ 2.62
PDS5AQ29RF7 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
PDS5AQ29RF7 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC31.41■■■□□ 2.62
PDS5AQ29RF7 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC31.4■■■□□ 2.62
PDS5AQ29RF7 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC31.4■■■□□ 2.62
PDS5AQ29RF7 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC31.39■■■□□ 2.62
PDS5AQ29RF7 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC31.39■■■□□ 2.62
PDS5AQ29RF7 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
PDS5AQ29RF7 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
PDS5AQ29RF7 WHAMMP2-203ENST00000563942 1603 ntBASIC31.39■■■□□ 2.61
PDS5AQ29RF7 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
PDS5AQ29RF7 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
PDS5AQ29RF7 ST7-AS1-201ENST00000456775 1889 ntBASIC31.38■■■□□ 2.61
PDS5AQ29RF7 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC31.38■■■□□ 2.61
PDS5AQ29RF7 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC31.38■■■□□ 2.61
PDS5AQ29RF7 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
PDS5AQ29RF7 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
PDS5AQ29RF7 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
PDS5AQ29RF7 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC31.35■■■□□ 2.61
PDS5AQ29RF7 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC31.35■■■□□ 2.61
PDS5AQ29RF7 METRNL-202ENST00000570778 967 ntTSL 5 BASIC31.35■■■□□ 2.61
PDS5AQ29RF7 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
PDS5AQ29RF7 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
PDS5AQ29RF7 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC31.35■■■□□ 2.61
PDS5AQ29RF7 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC31.34■■■□□ 2.61
PDS5AQ29RF7 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC31.34■■■□□ 2.61
PDS5AQ29RF7 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC31.34■■■□□ 2.61
PDS5AQ29RF7 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC31.33■■■□□ 2.61
PDS5AQ29RF7 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC31.33■■■□□ 2.61
PDS5AQ29RF7 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
PDS5AQ29RF7 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
PDS5AQ29RF7 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
PDS5AQ29RF7 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
PDS5AQ29RF7 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC31.3■■■□□ 2.6
PDS5AQ29RF7 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
PDS5AQ29RF7 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
PDS5AQ29RF7 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC31.28■■■□□ 2.6
PDS5AQ29RF7 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC31.28■■■□□ 2.6
PDS5AQ29RF7 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC31.28■■■□□ 2.6
PDS5AQ29RF7 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
PDS5AQ29RF7 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC31.28■■■□□ 2.6
PDS5AQ29RF7 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC31.27■■■□□ 2.6
PDS5AQ29RF7 CHST11-202ENST00000546689 756 ntTSL 2 BASIC31.27■■■□□ 2.6
PDS5AQ29RF7 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC31.26■■■□□ 2.59
PDS5AQ29RF7 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC31.24■■■□□ 2.59
PDS5AQ29RF7 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC31.24■■■□□ 2.59
PDS5AQ29RF7 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC31.24■■■□□ 2.59
PDS5AQ29RF7 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
PDS5AQ29RF7 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms