Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CXCL5P42830 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CXCL5P42830 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CXCL5P42830 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
CXCL5P42830 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CXCL5P42830 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
CXCL5P42830 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CXCL5P42830 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CXCL5P42830 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CXCL5P42830 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
CXCL5P42830 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CXCL5P42830 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CXCL5P42830 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CXCL5P42830 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CXCL5P42830 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CXCL5P42830 AL133380.1-201ENST00000506013 324 ntBASIC17.26■□□□□ 0.35
CXCL5P42830 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CXCL5P42830 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC17.26■□□□□ 0.35
CXCL5P42830 CREM-210ENST00000374721 2020 ntTSL 5 BASIC17.26■□□□□ 0.35
CXCL5P42830 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CXCL5P42830 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CXCL5P42830 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CXCL5P42830 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CXCL5P42830 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CXCL5P42830 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CXCL5P42830 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC17.24■□□□□ 0.35
CXCL5P42830 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CXCL5P42830 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CXCL5P42830 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC17.24■□□□□ 0.35
CXCL5P42830 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CXCL5P42830 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CXCL5P42830 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CXCL5P42830 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CXCL5P42830 AP004833.2-201ENST00000532228 1454 ntBASIC17.23■□□□□ 0.35
CXCL5P42830 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CXCL5P42830 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC17.23■□□□□ 0.35
CXCL5P42830 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CXCL5P42830 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC17.22■□□□□ 0.35
CXCL5P42830 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CXCL5P42830 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CXCL5P42830 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CXCL5P42830 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CXCL5P42830 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CXCL5P42830 SNAI3-AS1-204ENST00000567997 2048 ntBASIC17.2■□□□□ 0.34
CXCL5P42830 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC17.2■□□□□ 0.34
CXCL5P42830 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CXCL5P42830 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CXCL5P42830 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CXCL5P42830 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC17.19■□□□□ 0.34
CXCL5P42830 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CXCL5P42830 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC17.19■□□□□ 0.34
CXCL5P42830 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CXCL5P42830 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CXCL5P42830 PROC-203ENST00000409048 1586 ntTSL 5 BASIC17.19■□□□□ 0.34
CXCL5P42830 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC17.19■□□□□ 0.34
CXCL5P42830 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CXCL5P42830 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
CXCL5P42830 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CXCL5P42830 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CXCL5P42830 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CXCL5P42830 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC17.18■□□□□ 0.34
CXCL5P42830 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CXCL5P42830 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CXCL5P42830 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CXCL5P42830 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC17.17■□□□□ 0.34
CXCL5P42830 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CXCL5P42830 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CXCL5P42830 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CXCL5P42830 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CXCL5P42830 AL121749.1-202ENST00000609313 2153 ntBASIC17.16■□□□□ 0.34
CXCL5P42830 BX255925.1-201ENST00000566954 1854 ntBASIC17.16■□□□□ 0.34
CXCL5P42830 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CXCL5P42830 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CXCL5P42830 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CXCL5P42830 SHF-207ENST00000560540 2062 ntTSL 5 BASIC17.16■□□□□ 0.34
CXCL5P42830 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CXCL5P42830 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CXCL5P42830 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC17.15■□□□□ 0.34
CXCL5P42830 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CXCL5P42830 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC17.15■□□□□ 0.34
CXCL5P42830 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CXCL5P42830 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC17.14■□□□□ 0.34
CXCL5P42830 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
CXCL5P42830 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC17.14■□□□□ 0.33
CXCL5P42830 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CXCL5P42830 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CXCL5P42830 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CXCL5P42830 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CXCL5P42830 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CXCL5P42830 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CXCL5P42830 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CXCL5P42830 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CXCL5P42830 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CXCL5P42830 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CXCL5P42830 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CXCL5P42830 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CXCL5P42830 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CXCL5P42830 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CXCL5P42830 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC17.11■□□□□ 0.33
CXCL5P42830 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms