Protein–RNA interactions for Protein: O15234

CASC3, Protein CASC3, humanhuman

Known RBP Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3O15234 DUX4L15-201ENST00000611059 1267 ntBASIC25.39■■□□□ 1.66
CASC3O15234 DUX4L23-201ENST00000615195 1269 ntBASIC25.39■■□□□ 1.66
CASC3O15234 DUX4L24-201ENST00000617576 1269 ntBASIC25.39■■□□□ 1.66
CASC3O15234 DUX4L22-201ENST00000618238 1269 ntBASIC25.39■■□□□ 1.66
CASC3O15234 DUX4L20-201ENST00000619712 1269 ntBASIC25.39■■□□□ 1.66
CASC3O15234 DUX4L21-201ENST00000622058 1269 ntBASIC25.39■■□□□ 1.66
CASC3O15234 DUX4L10-201ENST00000622460 1267 ntBASIC25.39■■□□□ 1.66
CASC3O15234 DUX4L25-201ENST00000624915 1269 ntBASIC25.39■■□□□ 1.66
CASC3O15234 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.65
CASC3O15234 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
CASC3O15234 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CASC3O15234 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC25.38■■□□□ 1.65
CASC3O15234 EI24-212ENST00000615917 1407 ntTSL 2 BASIC25.37■■□□□ 1.65
CASC3O15234 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC25.37■■□□□ 1.65
CASC3O15234 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CASC3O15234 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
CASC3O15234 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CASC3O15234 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC25.36■■□□□ 1.65
CASC3O15234 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC25.35■■□□□ 1.65
CASC3O15234 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
CASC3O15234 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CASC3O15234 HES6-205ENST00000409356 528 ntTSL 2 BASIC25.34■■□□□ 1.65
CASC3O15234 ABHD17AP3-201ENST00000503096 1137 ntBASIC25.34■■□□□ 1.65
CASC3O15234 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC25.34■■□□□ 1.65
CASC3O15234 BRD4-212ENST00000630599 726 ntTSL 2 BASIC25.34■■□□□ 1.65
CASC3O15234 CHML-204ENST00000638121 920 ntTSL 2 BASIC25.34■■□□□ 1.65
CASC3O15234 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC25.34■■□□□ 1.65
CASC3O15234 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC25.34■■□□□ 1.65
CASC3O15234 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC25.32■■□□□ 1.64
CASC3O15234 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
CASC3O15234 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CASC3O15234 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
CASC3O15234 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
CASC3O15234 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
CASC3O15234 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC25.3■■□□□ 1.64
CASC3O15234 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
CASC3O15234 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CASC3O15234 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC25.29■■□□□ 1.64
CASC3O15234 AC010864.1-201ENST00000609407 1511 ntBASIC25.29■■□□□ 1.64
CASC3O15234 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC25.29■■□□□ 1.64
CASC3O15234 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC25.29■■□□□ 1.64
CASC3O15234 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CASC3O15234 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CASC3O15234 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CASC3O15234 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
CASC3O15234 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
CASC3O15234 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
CASC3O15234 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
CASC3O15234 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
CASC3O15234 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CASC3O15234 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC25.26■■□□□ 1.63
CASC3O15234 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
CASC3O15234 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC25.25■■□□□ 1.63
CASC3O15234 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CASC3O15234 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CASC3O15234 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC25.23■■□□□ 1.63
CASC3O15234 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC25.23■■□□□ 1.63
CASC3O15234 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CASC3O15234 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CASC3O15234 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC25.22■■□□□ 1.63
CASC3O15234 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.63
CASC3O15234 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.63
CASC3O15234 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
CASC3O15234 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
CASC3O15234 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC25.2■■□□□ 1.62
CASC3O15234 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
CASC3O15234 CHST11-202ENST00000546689 756 ntTSL 2 BASIC25.19■■□□□ 1.62
CASC3O15234 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC25.19■■□□□ 1.62
CASC3O15234 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
CASC3O15234 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CASC3O15234 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
CASC3O15234 LINC00273-201ENST00000539813 1452 ntBASIC25.18■■□□□ 1.62
CASC3O15234 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CASC3O15234 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC25.17■■□□□ 1.62
CASC3O15234 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CASC3O15234 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
CASC3O15234 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
CASC3O15234 SRP68-213ENST00000629930 165 ntTSL 5 BASIC25.15■■□□□ 1.62
CASC3O15234 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CASC3O15234 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CASC3O15234 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC25.13■■□□□ 1.61
CASC3O15234 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CASC3O15234 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.61
CASC3O15234 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CASC3O15234 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
CASC3O15234 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CASC3O15234 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC25.12■■□□□ 1.61
CASC3O15234 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC25.12■■□□□ 1.61
CASC3O15234 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CASC3O15234 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC25.12■■□□□ 1.61
CASC3O15234 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CASC3O15234 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CASC3O15234 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC25.11■■□□□ 1.61
CASC3O15234 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CASC3O15234 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CASC3O15234 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC25.11■■□□□ 1.61
CASC3O15234 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CASC3O15234 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC25.1■■□□□ 1.61
CASC3O15234 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC25.1■■□□□ 1.61
CASC3O15234 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC25.1■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms