Protein–RNA interactions for Protein: A0A075B6P5

IGKV2-28, Immunoglobulin kappa variable 2-28, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2-28A0A075B6P5 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
IGKV2-28A0A075B6P5 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
IGKV2-28A0A075B6P5 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
IGKV2-28A0A075B6P5 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
IGKV2-28A0A075B6P5 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
IGKV2-28A0A075B6P5 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
IGKV2-28A0A075B6P5 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
IGKV2-28A0A075B6P5 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
IGKV2-28A0A075B6P5 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
IGKV2-28A0A075B6P5 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
IGKV2-28A0A075B6P5 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
IGKV2-28A0A075B6P5 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
IGKV2-28A0A075B6P5 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
IGKV2-28A0A075B6P5 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IGKV2-28A0A075B6P5 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IGKV2-28A0A075B6P5 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
IGKV2-28A0A075B6P5 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC17.02■□□□□ 0.32
IGKV2-28A0A075B6P5 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
IGKV2-28A0A075B6P5 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
IGKV2-28A0A075B6P5 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC17.01■□□□□ 0.31
IGKV2-28A0A075B6P5 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC17.01■□□□□ 0.31
IGKV2-28A0A075B6P5 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
IGKV2-28A0A075B6P5 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
IGKV2-28A0A075B6P5 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
IGKV2-28A0A075B6P5 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
IGKV2-28A0A075B6P5 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
IGKV2-28A0A075B6P5 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
IGKV2-28A0A075B6P5 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC16.99■□□□□ 0.31
IGKV2-28A0A075B6P5 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
IGKV2-28A0A075B6P5 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
IGKV2-28A0A075B6P5 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC16.99■□□□□ 0.31
IGKV2-28A0A075B6P5 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC16.99■□□□□ 0.31
IGKV2-28A0A075B6P5 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC16.99■□□□□ 0.31
IGKV2-28A0A075B6P5 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
IGKV2-28A0A075B6P5 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
IGKV2-28A0A075B6P5 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
IGKV2-28A0A075B6P5 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
IGKV2-28A0A075B6P5 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
IGKV2-28A0A075B6P5 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
IGKV2-28A0A075B6P5 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
IGKV2-28A0A075B6P5 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
IGKV2-28A0A075B6P5 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
IGKV2-28A0A075B6P5 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
IGKV2-28A0A075B6P5 BX255925.1-201ENST00000566954 1854 ntBASIC16.95■□□□□ 0.3
IGKV2-28A0A075B6P5 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
IGKV2-28A0A075B6P5 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC16.95■□□□□ 0.3
IGKV2-28A0A075B6P5 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
IGKV2-28A0A075B6P5 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
IGKV2-28A0A075B6P5 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
IGKV2-28A0A075B6P5 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
IGKV2-28A0A075B6P5 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
IGKV2-28A0A075B6P5 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC16.94■□□□□ 0.3
IGKV2-28A0A075B6P5 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC16.94■□□□□ 0.3
IGKV2-28A0A075B6P5 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
IGKV2-28A0A075B6P5 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
IGKV2-28A0A075B6P5 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
IGKV2-28A0A075B6P5 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
IGKV2-28A0A075B6P5 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
IGKV2-28A0A075B6P5 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
IGKV2-28A0A075B6P5 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
IGKV2-28A0A075B6P5 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
IGKV2-28A0A075B6P5 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
IGKV2-28A0A075B6P5 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
IGKV2-28A0A075B6P5 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC16.92■□□□□ 0.3
IGKV2-28A0A075B6P5 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
IGKV2-28A0A075B6P5 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC16.91■□□□□ 0.3
IGKV2-28A0A075B6P5 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC16.91■□□□□ 0.3
IGKV2-28A0A075B6P5 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
IGKV2-28A0A075B6P5 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
IGKV2-28A0A075B6P5 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
IGKV2-28A0A075B6P5 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
IGKV2-28A0A075B6P5 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC16.9■□□□□ 0.3
IGKV2-28A0A075B6P5 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
IGKV2-28A0A075B6P5 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
IGKV2-28A0A075B6P5 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
IGKV2-28A0A075B6P5 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
IGKV2-28A0A075B6P5 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
IGKV2-28A0A075B6P5 AL449106.1-201ENST00000608517 1980 ntBASIC16.89■□□□□ 0.3
IGKV2-28A0A075B6P5 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
IGKV2-28A0A075B6P5 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC16.89■□□□□ 0.29
IGKV2-28A0A075B6P5 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC16.89■□□□□ 0.29
IGKV2-28A0A075B6P5 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC16.89■□□□□ 0.29
IGKV2-28A0A075B6P5 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
IGKV2-28A0A075B6P5 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
IGKV2-28A0A075B6P5 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
IGKV2-28A0A075B6P5 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
IGKV2-28A0A075B6P5 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
IGKV2-28A0A075B6P5 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
IGKV2-28A0A075B6P5 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
IGKV2-28A0A075B6P5 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
IGKV2-28A0A075B6P5 SHF-208ENST00000560734 1731 ntTSL 3 BASIC16.87■□□□□ 0.29
IGKV2-28A0A075B6P5 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
IGKV2-28A0A075B6P5 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC16.87■□□□□ 0.29
IGKV2-28A0A075B6P5 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC16.87■□□□□ 0.29
IGKV2-28A0A075B6P5 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC16.87■□□□□ 0.29
IGKV2-28A0A075B6P5 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
IGKV2-28A0A075B6P5 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
IGKV2-28A0A075B6P5 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
IGKV2-28A0A075B6P5 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC16.86■□□□□ 0.29
IGKV2-28A0A075B6P5 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms