Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LRTM1Q9HBL6 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LRTM1Q9HBL6 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRTM1Q9HBL6 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LRTM1Q9HBL6 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRTM1Q9HBL6 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.2■□□□□ 0.66
LRTM1Q9HBL6 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRTM1Q9HBL6 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.2■□□□□ 0.66
LRTM1Q9HBL6 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LRTM1Q9HBL6 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRTM1Q9HBL6 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.2■□□□□ 0.66
LRTM1Q9HBL6 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.2■□□□□ 0.66
LRTM1Q9HBL6 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
LRTM1Q9HBL6 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.2■□□□□ 0.66
LRTM1Q9HBL6 AC011767.1-201ENST00000617410 1153 ntBASIC19.2■□□□□ 0.66
LRTM1Q9HBL6 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.2■□□□□ 0.66
LRTM1Q9HBL6 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRTM1Q9HBL6 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LRTM1Q9HBL6 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LRTM1Q9HBL6 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRTM1Q9HBL6 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.2■□□□□ 0.66
LRTM1Q9HBL6 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
LRTM1Q9HBL6 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.2■□□□□ 0.66
LRTM1Q9HBL6 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LRTM1Q9HBL6 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRTM1Q9HBL6 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.19■□□□□ 0.66
LRTM1Q9HBL6 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.19■□□□□ 0.66
LRTM1Q9HBL6 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.19■□□□□ 0.66
LRTM1Q9HBL6 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRTM1Q9HBL6 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
LRTM1Q9HBL6 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRTM1Q9HBL6 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRTM1Q9HBL6 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.19■□□□□ 0.66
LRTM1Q9HBL6 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.19■□□□□ 0.66
LRTM1Q9HBL6 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRTM1Q9HBL6 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
LRTM1Q9HBL6 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.19■□□□□ 0.66
LRTM1Q9HBL6 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LRTM1Q9HBL6 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRTM1Q9HBL6 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LRTM1Q9HBL6 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRTM1Q9HBL6 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRTM1Q9HBL6 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.18■□□□□ 0.66
LRTM1Q9HBL6 AC116562.4-201ENST00000641316 2276 ntBASIC19.18■□□□□ 0.66
LRTM1Q9HBL6 KRT8P17-201ENST00000453110 1448 ntBASIC19.18■□□□□ 0.66
LRTM1Q9HBL6 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRTM1Q9HBL6 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRTM1Q9HBL6 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRTM1Q9HBL6 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
LRTM1Q9HBL6 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRTM1Q9HBL6 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
LRTM1Q9HBL6 AC006015.1-201ENST00000429970 570 ntBASIC19.18■□□□□ 0.66
LRTM1Q9HBL6 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRTM1Q9HBL6 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LRTM1Q9HBL6 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
LRTM1Q9HBL6 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRTM1Q9HBL6 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
LRTM1Q9HBL6 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRTM1Q9HBL6 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
LRTM1Q9HBL6 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRTM1Q9HBL6 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRTM1Q9HBL6 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRTM1Q9HBL6 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.18■□□□□ 0.66
LRTM1Q9HBL6 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LRTM1Q9HBL6 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
LRTM1Q9HBL6 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.18■□□□□ 0.66
LRTM1Q9HBL6 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.18■□□□□ 0.66
LRTM1Q9HBL6 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRTM1Q9HBL6 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.17■□□□□ 0.66
LRTM1Q9HBL6 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRTM1Q9HBL6 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LRTM1Q9HBL6 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRTM1Q9HBL6 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRTM1Q9HBL6 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.17■□□□□ 0.66
LRTM1Q9HBL6 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRTM1Q9HBL6 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRTM1Q9HBL6 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRTM1Q9HBL6 KRT18P68-201ENST00000392293 1000 ntBASIC19.17■□□□□ 0.66
LRTM1Q9HBL6 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.17■□□□□ 0.66
LRTM1Q9HBL6 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LRTM1Q9HBL6 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.17■□□□□ 0.66
LRTM1Q9HBL6 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.17■□□□□ 0.66
LRTM1Q9HBL6 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.17■□□□□ 0.66
LRTM1Q9HBL6 AC105020.6-201ENST00000621523 1217 ntBASIC19.17■□□□□ 0.66
LRTM1Q9HBL6 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.17■□□□□ 0.66
LRTM1Q9HBL6 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRTM1Q9HBL6 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LRTM1Q9HBL6 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
LRTM1Q9HBL6 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
LRTM1Q9HBL6 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRTM1Q9HBL6 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.16■□□□□ 0.66
LRTM1Q9HBL6 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
LRTM1Q9HBL6 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
LRTM1Q9HBL6 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRTM1Q9HBL6 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LRTM1Q9HBL6 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.16■□□□□ 0.66
LRTM1Q9HBL6 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRTM1Q9HBL6 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRTM1Q9HBL6 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
LRTM1Q9HBL6 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms