Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NUDCD3Q8IVD9 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.81■□□□□ 0.76
NUDCD3Q8IVD9 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NUDCD3Q8IVD9 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NUDCD3Q8IVD9 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NUDCD3Q8IVD9 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
NUDCD3Q8IVD9 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NUDCD3Q8IVD9 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NUDCD3Q8IVD9 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
NUDCD3Q8IVD9 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
NUDCD3Q8IVD9 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
NUDCD3Q8IVD9 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NUDCD3Q8IVD9 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
NUDCD3Q8IVD9 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NUDCD3Q8IVD9 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.8■□□□□ 0.76
NUDCD3Q8IVD9 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NUDCD3Q8IVD9 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NUDCD3Q8IVD9 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.8■□□□□ 0.76
NUDCD3Q8IVD9 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NUDCD3Q8IVD9 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
NUDCD3Q8IVD9 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NUDCD3Q8IVD9 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NUDCD3Q8IVD9 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
NUDCD3Q8IVD9 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
NUDCD3Q8IVD9 AC105265.2-201ENST00000467189 838 ntBASIC19.8■□□□□ 0.76
NUDCD3Q8IVD9 CCDC92B-201ENST00000575506 885 ntBASIC19.8■□□□□ 0.76
NUDCD3Q8IVD9 AC243732.1-201ENST00000612648 864 ntBASIC19.8■□□□□ 0.76
NUDCD3Q8IVD9 AC110285.6-201ENST00000617652 491 ntBASIC19.8■□□□□ 0.76
NUDCD3Q8IVD9 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.8■□□□□ 0.76
NUDCD3Q8IVD9 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NUDCD3Q8IVD9 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.8■□□□□ 0.76
NUDCD3Q8IVD9 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NUDCD3Q8IVD9 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.8■□□□□ 0.76
NUDCD3Q8IVD9 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
NUDCD3Q8IVD9 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NUDCD3Q8IVD9 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NUDCD3Q8IVD9 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NUDCD3Q8IVD9 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NUDCD3Q8IVD9 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NUDCD3Q8IVD9 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
NUDCD3Q8IVD9 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.79■□□□□ 0.76
NUDCD3Q8IVD9 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NUDCD3Q8IVD9 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.79■□□□□ 0.76
NUDCD3Q8IVD9 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
NUDCD3Q8IVD9 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.79■□□□□ 0.76
NUDCD3Q8IVD9 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NUDCD3Q8IVD9 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NUDCD3Q8IVD9 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NUDCD3Q8IVD9 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.79■□□□□ 0.76
NUDCD3Q8IVD9 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
NUDCD3Q8IVD9 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
NUDCD3Q8IVD9 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NUDCD3Q8IVD9 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
NUDCD3Q8IVD9 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NUDCD3Q8IVD9 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.79■□□□□ 0.76
NUDCD3Q8IVD9 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.79■□□□□ 0.76
NUDCD3Q8IVD9 Z82202.1-201ENST00000623446 1880 ntBASIC19.79■□□□□ 0.76
NUDCD3Q8IVD9 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.79■□□□□ 0.76
NUDCD3Q8IVD9 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NUDCD3Q8IVD9 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
NUDCD3Q8IVD9 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
NUDCD3Q8IVD9 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NUDCD3Q8IVD9 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
NUDCD3Q8IVD9 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
NUDCD3Q8IVD9 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
NUDCD3Q8IVD9 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NUDCD3Q8IVD9 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
NUDCD3Q8IVD9 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NUDCD3Q8IVD9 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.78■□□□□ 0.76
NUDCD3Q8IVD9 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
NUDCD3Q8IVD9 RBM17P2-201ENST00000616397 1405 ntBASIC19.78■□□□□ 0.76
NUDCD3Q8IVD9 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
NUDCD3Q8IVD9 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NUDCD3Q8IVD9 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
NUDCD3Q8IVD9 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
NUDCD3Q8IVD9 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.78■□□□□ 0.76
NUDCD3Q8IVD9 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NUDCD3Q8IVD9 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.78■□□□□ 0.76
NUDCD3Q8IVD9 KRT18P20-201ENST00000548986 1279 ntBASIC19.78■□□□□ 0.76
NUDCD3Q8IVD9 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.78■□□□□ 0.76
NUDCD3Q8IVD9 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.78■□□□□ 0.76
NUDCD3Q8IVD9 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NUDCD3Q8IVD9 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NUDCD3Q8IVD9 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
NUDCD3Q8IVD9 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
NUDCD3Q8IVD9 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
NUDCD3Q8IVD9 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NUDCD3Q8IVD9 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
NUDCD3Q8IVD9 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
NUDCD3Q8IVD9 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
NUDCD3Q8IVD9 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.77■□□□□ 0.76
NUDCD3Q8IVD9 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.77■□□□□ 0.76
NUDCD3Q8IVD9 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.77■□□□□ 0.76
NUDCD3Q8IVD9 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.77■□□□□ 0.76
NUDCD3Q8IVD9 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NUDCD3Q8IVD9 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NUDCD3Q8IVD9 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.77■□□□□ 0.76
NUDCD3Q8IVD9 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.76
NUDCD3Q8IVD9 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
NUDCD3Q8IVD9 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms