Protein–RNA interactions for Protein: P38759

VPS29, Vacuolar protein sorting-associated protein 29, yeastyeast

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS29P38759 YPR160W-AYPR160W-A 81 nt2.7□□□□□ -1.98
VPS29P38759 YML054C-AYML054C-A 159 nt2.69□□□□□ -1.98
VPS29P38759 KOG1YHR186C 4674 nt2.69□□□□□ -1.98
VPS29P38759 PRP16YKR086W 3216 nt2.68□□□□□ -1.98
VPS29P38759 SLH1YGR271W 5904 nt2.66□□□□□ -1.98
VPS29P38759 PSD2YGR170W 3417 nt2.66□□□□□ -1.98
VPS29P38759 EST1YLR233C 2100 nt2.66□□□□□ -1.98
VPS29P38759 AI1Q0050 2505 nt2.66□□□□□ -1.98
VPS29P38759 CYR1YJL005W 6081 nt2.65□□□□□ -1.98
VPS29P38759 MSB1YOR188W 3414 nt2.65□□□□□ -1.98
VPS29P38759 HER1YOR227W 3741 nt2.65□□□□□ -1.99
VPS29P38759 YLR422WYLR422W 5799 nt2.64□□□□□ -1.99
VPS29P38759 YOR055WYOR055W 435 nt2.64□□□□□ -1.99
VPS29P38759 snR38snR38 95 nt2.64□□□□□ -1.99
VPS29P38759 SXM1YDR395W 2835 nt2.64□□□□□ -1.99
VPS29P38759 snR69snR69 101 nt2.63□□□□□ -1.99
VPS29P38759 PET127YOR017W 2403 nt2.62□□□□□ -1.99
VPS29P38759 ECM29YHL030W 5607 nt2.62□□□□□ -1.99
VPS29P38759 PDR11YIL013C 4236 nt2.62□□□□□ -1.99
VPS29P38759 CDC25YLR310C 4770 nt2.61□□□□□ -1.99
VPS29P38759 STH1YIL126W 4080 nt2.6□□□□□ -1.99
VPS29P38759 NIP1YMR309C 2439 nt2.6□□□□□ -1.99
VPS29P38759 RDS3YPR094W 324 nt2.6□□□□□ -1.99
VPS29P38759 STO1YMR125W 2586 nt2.59□□□□□ -1.99
VPS29P38759 SEC8YPR055W 3198 nt2.59□□□□□ -1.99
VPS29P38759 ULP2YIL031W 3105 nt2.58□□□□□ -2
VPS29P38759 YSP1YHR155W 3687 nt2.58□□□□□ -2
VPS29P38759 snR14snR14 160 nt2.57□□□□□ -2
VPS29P38759 SEC7YDR170C 6030 nt2.57□□□□□ -2
VPS29P38759 GEA2YEL022W 4380 nt2.56□□□□□ -2
VPS29P38759 SPF1YEL031W 3648 nt2.56□□□□□ -2
VPS29P38759 TOR1YJR066W 7413 nt2.56□□□□□ -2
VPS29P38759 MYO4YAL029C 4416 nt2.55□□□□□ -2
VPS29P38759 UTP22YGR090W 3714 nt2.55□□□□□ -2
VPS29P38759 SCD5YOR329C 2619 nt2.55□□□□□ -2
VPS29P38759 NUM1YDR150W 8247 nt2.54□□□□□ -2
VPS29P38759 SMC4YLR086W 4257 nt2.54□□□□□ -2
VPS29P38759 APL3YBL037W 3078 nt2.53□□□□□ -2
VPS29P38759 CSE1YGL238W 2883 nt2.53□□□□□ -2
VPS29P38759 PKH3YDR466W 2697 nt2.53□□□□□ -2.01
VPS29P38759 YLR399W-AYLR399W-A 105 nt2.52□□□□□ -2.01
VPS29P38759 TFC3YAL001C 3483 nt2.51□□□□□ -2.01
VPS29P38759 MOT1YPL082C 5604 nt2.51□□□□□ -2.01
VPS29P38759 KAP122YGL016W 3246 nt2.51□□□□□ -2.01
VPS29P38759 TOM1YDR457W 9807 nt2.5□□□□□ -2.01
VPS29P38759 YCS4YLR272C 3531 nt2.49□□□□□ -2.01
VPS29P38759 MSN5YDR335W 3675 nt2.48□□□□□ -2.01
VPS29P38759 tN(GUU)QtN(GUU)Q 71 nt2.47□□□□□ -2.01
VPS29P38759 HUG1YML058W-A 207 nt2.47□□□□□ -2.01
VPS29P38759 PET111YMR257C 2403 nt2.46□□□□□ -2.02
VPS29P38759 YJL077W-AYJL077W-A 87 nt2.44□□□□□ -2.02
VPS29P38759 CAT8YMR280C 4302 nt2.43□□□□□ -2.02
VPS29P38759 SEC3YER008C 4011 nt2.42□□□□□ -2.02
VPS29P38759 VPS13YLL040C 9435 nt2.41□□□□□ -2.02
VPS29P38759 UBP2YOR124C 3819 nt2.4□□□□□ -2.03
VPS29P38759 NST1YNL091W 3723 nt2.4□□□□□ -2.03
VPS29P38759 SKI3YPR189W 4299 nt2.39□□□□□ -2.03
VPS29P38759 SEC16YPL085W 6588 nt2.39□□□□□ -2.03
VPS29P38759 UBR2YLR024C 5619 nt2.39□□□□□ -2.03
VPS29P38759 YHR180W-AYHR180W-A 183 nt2.39□□□□□ -2.03
VPS29P38759 IRC20YLR247C 4671 nt2.38□□□□□ -2.03
VPS29P38759 MSH3YCR092C 3057 nt2.37□□□□□ -2.03
VPS29P38759 SIP4YJL089W 2490 nt2.36□□□□□ -2.03
VPS29P38759 CSF1YLR087C 8877 nt2.36□□□□□ -2.03
VPS29P38759 SEC31YDL195W 3822 nt2.34□□□□□ -2.03
VPS29P38759 KCS1YDR017C 3153 nt2.34□□□□□ -2.04
VPS29P38759 EST2YLR318W 2655 nt2.34□□□□□ -2.04
VPS29P38759 PAU12YGR294W 363 nt2.33□□□□□ -2.04
VPS29P38759 TRA1YHR099W 11235 nt2.32□□□□□ -2.04
VPS29P38759 BUL2YML111W 2763 nt2.31□□□□□ -2.04
VPS29P38759 ATG9YDL149W 2994 nt2.31□□□□□ -2.04
VPS29P38759 SWI4YER111C 3282 nt2.3□□□□□ -2.04
VPS29P38759 FYV8YGR196C 2454 nt2.3□□□□□ -2.04
VPS29P38759 NUP145YGL092W 3954 nt2.3□□□□□ -2.04
VPS29P38759 BNI1YNL271C 5862 nt2.3□□□□□ -2.04
VPS29P38759 BPH1YCR032W 6504 nt2.3□□□□□ -2.04
VPS29P38759 IRA2YOL081W 9240 nt2.29□□□□□ -2.04
VPS29P38759 tQ(UUG)QtQ(UUG)Q 76 nt2.29□□□□□ -2.04
VPS29P38759 BNR1YIL159W 4128 nt2.29□□□□□ -2.04
VPS29P38759 FIG2YCR089W 4830 nt2.27□□□□□ -2.05
VPS29P38759 YLR419WYLR419W 4308 nt2.27□□□□□ -2.05
VPS29P38759 PEP1YBL017C 4740 nt2.27□□□□□ -2.05
VPS29P38759 YOL098CYOL098C 3114 nt2.26□□□□□ -2.05
VPS29P38759 YHR214C-BYHR214C-B 5382 nt2.23□□□□□ -2.05
VPS29P38759 FAB1YFR019W 6837 nt2.23□□□□□ -2.05
VPS29P38759 YPL060C-AYPL060C-A 3315 nt2.23□□□□□ -2.05
VPS29P38759 DNF1YER166W 4716 nt2.21□□□□□ -2.06
VPS29P38759 TMA7YLR262C-A 195 nt2.2□□□□□ -2.06
VPS29P38759 YLL006W-AYLL006W-A 177 nt2.19□□□□□ -2.06
VPS29P38759 USO1YDL058W 5373 nt2.18□□□□□ -2.06
VPS29P38759 TOR2YKL203C 7425 nt2.15□□□□□ -2.06
VPS29P38759 DGR1YNL130C-A 147 nt2.14□□□□□ -2.07
VPS29P38759 YER090C-AYER090C-A 90 nt2.1□□□□□ -2.07
VPS29P38759 SPP41YDR464W 4308 nt2.09□□□□□ -2.07
VPS29P38759 MLP2YIL149C 5040 nt2.09□□□□□ -2.08
VPS29P38759 NEO1YIL048W 3456 nt2.08□□□□□ -2.08
VPS29P38759 CLU1YMR012W 3834 nt2.08□□□□□ -2.08
VPS29P38759 YDL114W-AYDL114W-A 114 nt2.06□□□□□ -2.08
VPS29P38759 YOR376W-AYOR376W-A 156 nt2.06□□□□□ -2.08
VPS29P38759 NUP188YML103C 4968 nt2.05□□□□□ -2.08
Retrieved 100 of 7,029 protein–RNA pairs in 77.7 ms