RNA–Protein interactions for RNA: YGR271W

SLH1, Transcript of Putative RNA helicase related to Ski2p, yeast

Gene SLH1, Length 5,904 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLH1	YGR271W	DRS1	P32892	752 aa	Known RBP	4.36	□□□□□ -1.71
SLH1	YGR271W	MON2	P48563	1636 aa	Predicted RBP	4.31	□□□□□ -1.72
SLH1	YGR271W	SCT1	P32784	759 aa		4.04	□□□□□ -1.76
SLH1	YGR271W	RQC2	Q12532	1038 aa	Known RBP	4.02	□□□□□ -1.77
SLH1	YGR271W	MTC1	P47018	478 aa	Known RBP	4.02	□□□□□ -1.77
SLH1	YGR271W	MNN4	P36044	1178 aa		3.94	□□□□□ -1.78
SLH1	YGR271W	TFA1	P36100	482 aa		3.94	□□□□□ -1.78
SLH1	YGR271W	AIM44	Q99299	758 aa		3.93	□□□□□ -1.78
SLH1	YGR271W	ASF1	P32447	279 aa		3.91	□□□□□ -1.78
SLH1	YGR271W	BFR2	Q06631	534 aa	Known RBP	3.86	□□□□□ -1.79
SLH1	YGR271W	FPR3	P38911	411 aa	Known RBP	3.86	□□□□□ -1.79
SLH1	YGR271W	TAF7	Q05021	590 aa		3.83	□□□□□ -1.8
SLH1	YGR271W	PSH1	Q12161	406 aa		3.67	□□□□□ -1.82
SLH1	YGR271W	KOG1	P38873	1557 aa		3.63	□□□□□ -1.83
SLH1	YGR271W	DNA2	P38859	1522 aa		3.63	□□□□□ -1.83
SLH1	YGR271W	FUN12	P39730	1002 aa	Known RBP	3.63	□□□□□ -1.83
SLH1	YGR271W	QCR6	P00127	147 aa		3.61	□□□□□ -1.83
SLH1	YGR271W	ORC1	P54784	914 aa	Predicted RBP	3.61	□□□□□ -1.83
SLH1	YGR271W	DIP2	Q12220	943 aa	Predicted RBP	3.6	□□□□□ -1.83
SLH1	YGR271W	SPA2	P23201	1466 aa	Known RBP	3.6	□□□□□ -1.83
SLH1	YGR271W	RNA1	P11745	407 aa	Known RBP	3.59	□□□□□ -1.83
SLH1	YGR271W	DEF1	P35732	738 aa	Known RBP	3.59	□□□□□ -1.84
SLH1	YGR271W	CAB3	P36076	571 aa		3.59	□□□□□ -1.84
SLH1	YGR271W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	3.59	□□□□□ -1.84	not detected
SLH1	YGR271W	TY1B-DR4	Q07793	1604 aa		3.58	□□□□□ -1.84
SLH1	YGR271W	NOP7	P53261	605 aa	Known RBP	3.57	□□□□□ -1.84
SLH1	YGR271W	NMD2	P38798	1089 aa	Known RBP	3.56	□□□□□ -1.84
SLH1	YGR271W	SWR1	Q05471	1514 aa		3.56	□□□□□ -1.84
SLH1	YGR271W	AVT3	P36062	692 aa		3.55	□□□□□ -1.84
SLH1	YGR271W	LEU3	P08638	886 aa		3.54	□□□□□ -1.84
SLH1	YGR271W	NOP2	P40991	618 aa	Known RBP	3.54	□□□□□ -1.84
SLH1	YGR271W	POL5	P39985	1022 aa	Known RBP	3.53	□□□□□ -1.84
SLH1	YGR271W	SAS10	Q12136	610 aa	Predicted RBP	3.53	□□□□□ -1.84
SLH1	YGR271W	INO80	P53115	1489 aa		3.53	□□□□□ -1.84
SLH1	YGR271W	YRB30	P53107	440 aa	Predicted RBP	3.52	□□□□□ -1.85
SLH1	YGR271W	YTA6	P40328	754 aa		3.52	□□□□□ -1.85
SLH1	YGR271W	NAP1	P25293	417 aa	Known RBP	3.51	□□□□□ -1.85
SLH1	YGR271W	ENP1	P38333	483 aa	Known RBP	3.51	□□□□□ -1.85
SLH1	YGR271W	EBP2	P36049	427 aa	Known RBP	3.49	□□□□□ -1.85
SLH1	YGR271W	FPR4	Q06205	392 aa	Predicted RBP	3.49	□□□□□ -1.85
SLH1	YGR271W	RLP24	Q07915	199 aa	Known RBP	3.48	□□□□□ -1.85
SLH1	YGR271W	HSP82	P02829	709 aa	Known RBP	3.46	□□□□□ -1.86
SLH1	YGR271W	EAF7	P53911	425 aa	Known RBP	3.46	□□□□□ -1.86
SLH1	YGR271W	SIS2	P36024	562 aa		3.46	□□□□□ -1.86
SLH1	YGR271W	ARP5	P53946	755 aa		3.45	□□□□□ -1.86
SLH1	YGR271W	RTT106	P40161	455 aa		3.44	□□□□□ -1.86
SLH1	YGR271W	NST1	P53935	1240 aa		3.44	□□□□□ -1.86
SLH1	YGR271W	PLP2	Q12017	286 aa		3.43	□□□□□ -1.86
SLH1	YGR271W	NOP58	Q12499	511 aa	Known RBP	3.43	□□□□□ -1.86
SLH1	YGR271W	SYH1	Q02875	849 aa	Known RBP	3.42	□□□□□ -1.86
SLH1	YGR271W	RIX1	P38883	763 aa	Predicted RBP	3.42	□□□□□ -1.86
SLH1	YGR271W	YFR016C	P43597	1233 aa	Known RBP	3.42	□□□□□ -1.86
SLH1	YGR271W	NOG1	Q02892	647 aa	Known RBP	3.4	□□□□□ -1.86
SLH1	YGR271W	NOP53	Q12080	455 aa	Known RBP	3.4	□□□□□ -1.86
SLH1	YGR271W	HSC82	P15108	705 aa	Known RBP	3.4	□□□□□ -1.87
SLH1	YGR271W	HGH1	P48362	394 aa	Known RBP	3.4	□□□□□ -1.87
SLH1	YGR271W	RLF2	Q12495	606 aa		3.4	□□□□□ -1.87
SLH1	YGR271W	RPP2A	P05319	106 aa	Known RBP	3.39	□□□□□ -1.87
SLH1	YGR271W	MFT1	P33441	392 aa	Known RBP	3.39	□□□□□ -1.87
SLH1	YGR271W	URN1	Q06525	465 aa	Known RBP	3.39	□□□□□ -1.87
SLH1	YGR271W	TOA1	P32773	286 aa		3.38	□□□□□ -1.87
SLH1	YGR271W	YGL081W	P53156	320 aa		3.38	□□□□□ -1.87
SLH1	YGR271W	RPC31	P17890	251 aa		3.37	□□□□□ -1.87
SLH1	YGR271W	NMD3	P38861	518 aa	Known RBP	3.37	□□□□□ -1.87
SLH1	YGR271W	LEO1	P38439	464 aa		3.36	□□□□□ -1.87
SLH1	YGR271W	KRI1	P42846	591 aa	Known RBP	3.36	□□□□□ -1.87
SLH1	YGR271W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	3.36	□□□□□ -1.87	not detected
SLH1	YGR271W	DJP1	P40564	432 aa		3.36	□□□□□ -1.87
SLH1	YGR271W	GLE1	Q12315	538 aa		3.35	□□□□□ -1.87
SLH1	YGR271W	MPP10	P47083	593 aa	Known RBP	3.35	□□□□□ -1.87
SLH1	YGR271W	RIM101	P33400	625 aa		3.35	□□□□□ -1.87
SLH1	YGR271W	BTN2	P53286	410 aa		3.35	□□□□□ -1.87
SLH1	YGR271W	DPB3	P27344	201 aa		3.35	□□□□□ -1.87
SLH1	YGR271W	HIF1	Q12373	385 aa		3.35	□□□□□ -1.87
SLH1	YGR271W	PEP1	P32319	1579 aa		3.34	□□□□□ -1.87
SLH1	YGR271W	IRC20	Q06554	1556 aa		3.34	□□□□□ -1.87
SLH1	YGR271W	NOP8	Q08287	484 aa	Predicted RBP	3.34	□□□□□ -1.88
SLH1	YGR271W	JJJ1	P53863	590 aa		3.34	□□□□□ -1.88
SLH1	YGR271W	COG8	Q04632	607 aa		3.34	□□□□□ -1.88
SLH1	YGR271W	HOS4	P40480	1083 aa		3.33	□□□□□ -1.88
SLH1	YGR271W	JIP3	O13555	125 aa		3.33	□□□□□ -1.88
SLH1	YGR271W	RED1	P14291	827 aa		3.33	□□□□□ -1.88
SLH1	YGR271W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	3.33	□□□□□ -1.88	not detected
SLH1	YGR271W	BNI1	P41832	1953 aa		3.32	□□□□□ -1.88
SLH1	YGR271W	SSE1	P32589	693 aa	Known RBP	3.32	□□□□□ -1.88
SLH1	YGR271W	IFH1	P39520	1085 aa		3.32	□□□□□ -1.88
SLH1	YGR271W	CDC11	P32458	415 aa		3.32	□□□□□ -1.88
SLH1	YGR271W	FUN30	P31380	1131 aa		3.31	□□□□□ -1.88
SLH1	YGR271W	GPN2	Q08726	347 aa	Predicted RBP	3.31	□□□□□ -1.88
SLH1	YGR271W	SPT5	P27692	1063 aa	Known RBP	3.3	□□□□□ -1.88
SLH1	YGR271W	RNR4	P49723	345 aa	Known RBP	3.3	□□□□□ -1.88
SLH1	YGR271W	PAF1	P38351	445 aa		3.3	□□□□□ -1.88
SLH1	YGR271W	PDI1	P17967	522 aa	Known RBP	3.3	□□□□□ -1.88
SLH1	YGR271W	SPB4	P25808	606 aa	Predicted RBP	3.3	□□□□□ -1.88
SLH1	YGR271W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	3.3	□□□□□ -1.88	not detected
SLH1	YGR271W	RAD26	P40352	1085 aa		3.3	□□□□□ -1.88
SLH1	YGR271W	RSE1	Q04693	1361 aa	Known RBP	3.3	□□□□□ -1.88
SLH1	YGR271W	RCF1	Q03713	159 aa		3.29	□□□□□ -1.88
SLH1	YGR271W	ACE2	P21192	770 aa		3.29	□□□□□ -1.88
SLH1	YGR271W	TSR1	Q07381	788 aa	Known RBP	3.29	□□□□□ -1.88

Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms