RNA–Protein interactions for RNA: YHR214C-B

YHR214C-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YHR214C-B, Length 5,382 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YHR214C-BYHR214C-B SCT1P32784 759 aa3.04□□□□□ -1.92
YHR214C-BYHR214C-B BFR2Q06631 534 aaKnown RBP2.87□□□□□ -1.95
YHR214C-BYHR214C-B INO80P53115 1489 aa2.82□□□□□ -1.96
YHR214C-BYHR214C-B MTC1P47018 478 aaKnown RBP2.81□□□□□ -1.96
YHR214C-BYHR214C-B NSR1P27476 414 aaKnown RBP RIP-Chip data2.78□□□□□ -1.96not detected
YHR214C-BYHR214C-B NAP1P25293 417 aaKnown RBP2.75□□□□□ -1.97
YHR214C-BYHR214C-B MON2P48563 1636 aaPredicted RBP2.73□□□□□ -1.97
YHR214C-BYHR214C-B TAF7Q05021 590 aa2.71□□□□□ -1.98
YHR214C-BYHR214C-B RSE1Q04693 1361 aaKnown RBP2.69□□□□□ -1.98
YHR214C-BYHR214C-B YTA7P40340 1379 aa2.69□□□□□ -1.98
YHR214C-BYHR214C-B URN1Q06525 465 aaKnown RBP2.68□□□□□ -1.98
YHR214C-BYHR214C-B SPA2P23201 1466 aaKnown RBP2.68□□□□□ -1.98
YHR214C-BYHR214C-B DNA2P38859 1522 aa2.64□□□□□ -1.99
YHR214C-BYHR214C-B DRS1P32892 752 aaKnown RBP2.63□□□□□ -1.99
YHR214C-BYHR214C-B SWR1Q05471 1514 aa2.63□□□□□ -1.99
YHR214C-BYHR214C-B TCB3Q03640 1545 aaKnown RBP2.62□□□□□ -1.99
YHR214C-BYHR214C-B NAB3P38996 802 aaKnown RBP RIP-Chip data2.61□□□□□ -1.99not detected
YHR214C-BYHR214C-B SAS10Q12136 610 aaPredicted RBP2.61□□□□□ -1.99
YHR214C-BYHR214C-B PAF1P38351 445 aa2.6□□□□□ -1.99
YHR214C-BYHR214C-B KOG1P38873 1557 aa2.6□□□□□ -1.99
YHR214C-BYHR214C-B RTT106P40161 455 aa2.58□□□□□ -2
YHR214C-BYHR214C-B RQC2Q12532 1038 aaKnown RBP2.57□□□□□ -2
YHR214C-BYHR214C-B EDE1P34216 1381 aa2.56□□□□□ -2
YHR214C-BYHR214C-B SPT5P27692 1063 aaKnown RBP2.56□□□□□ -2
YHR214C-BYHR214C-B LEO1P38439 464 aa2.56□□□□□ -2
YHR214C-BYHR214C-B POL5P39985 1022 aaKnown RBP2.56□□□□□ -2
YHR214C-BYHR214C-B SMC4Q12267 1418 aa2.55□□□□□ -2
YHR214C-BYHR214C-B SPT6P23615 1451 aaKnown RBP2.54□□□□□ -2
YHR214C-BYHR214C-B UBP1P25037 809 aa2.54□□□□□ -2
YHR214C-BYHR214C-B RPP2BP02400 110 aaKnown RBP2.53□□□□□ -2
YHR214C-BYHR214C-B SIS2P36024 562 aa2.52□□□□□ -2.01
YHR214C-BYHR214C-B PSD2P53037 1138 aaKnown RBP2.52□□□□□ -2.01
YHR214C-BYHR214C-B BUD4P47136 1447 aa2.52□□□□□ -2.01
YHR214C-BYHR214C-B MIF2P35201 549 aa2.51□□□□□ -2.01
YHR214C-BYHR214C-B SSK2P53599 1579 aa2.51□□□□□ -2.01
YHR214C-BYHR214C-B TAF2P23255 1407 aa2.51□□□□□ -2.01
YHR214C-BYHR214C-B STH1P32597 1359 aa2.5□□□□□ -2.01
YHR214C-BYHR214C-B YFR016CP43597 1233 aaKnown RBP2.5□□□□□ -2.01
YHR214C-BYHR214C-B TFA1P36100 482 aa2.5□□□□□ -2.01
YHR214C-BYHR214C-B RRT14P40470 206 aa2.49□□□□□ -2.01
YHR214C-BYHR214C-B SGS1P35187 1447 aa2.49□□□□□ -2.01
YHR214C-BYHR214C-B YPR148CQ06523 435 aa2.48□□□□□ -2.01
YHR214C-BYHR214C-B CFT1Q06632 1357 aaKnown RBP2.47□□□□□ -2.01
YHR214C-BYHR214C-B LEU3P08638 886 aa2.47□□□□□ -2.01
YHR214C-BYHR214C-B ENP1P38333 483 aaKnown RBP2.47□□□□□ -2.01
YHR214C-BYHR214C-B TY1B-DR4Q07793 1604 aa2.47□□□□□ -2.01
YHR214C-BYHR214C-B DAL5P15365 543 aa2.47□□□□□ -2.01
YHR214C-BYHR214C-B TOP2P06786 1428 aaKnown RBP2.46□□□□□ -2.02
YHR214C-BYHR214C-B MYO2P19524 1574 aaKnown RBP2.46□□□□□ -2.02
YHR214C-BYHR214C-B SEC20P28791 383 aa2.46□□□□□ -2.02
YHR214C-BYHR214C-B MRX12P47084 519 aa2.46□□□□□ -2.02
YHR214C-BYHR214C-B PSH1Q12161 406 aa2.46□□□□□ -2.02
YHR214C-BYHR214C-B RPS9BP05755 195 aaKnown RBP2.46□□□□□ -2.02
YHR214C-BYHR214C-B ECM5Q03214 1411 aa2.45□□□□□ -2.02
YHR214C-BYHR214C-B THO2P53552 1597 aaKnown RBP2.45□□□□□ -2.02
YHR214C-BYHR214C-B SPT7P35177 1332 aa2.45□□□□□ -2.02
YHR214C-BYHR214C-B KRI1P42846 591 aaKnown RBP2.45□□□□□ -2.02
YHR214C-BYHR214C-B NOP7P53261 605 aaKnown RBP2.45□□□□□ -2.02
YHR214C-BYHR214C-B BRE1Q07457 700 aaKnown RBP2.44□□□□□ -2.02
YHR214C-BYHR214C-B TRM3Q07527 1436 aa2.44□□□□□ -2.02
YHR214C-BYHR214C-B YJL181WP46987 611 aa2.44□□□□□ -2.02
YHR214C-BYHR214C-B ENP2P48234 707 aaKnown RBP2.44□□□□□ -2.02
YHR214C-BYHR214C-B TPM1P17536 199 aaKnown RBP2.43□□□□□ -2.02
YHR214C-BYHR214C-B BNR1P40450 1375 aa2.43□□□□□ -2.02
YHR214C-BYHR214C-B MNN4P36044 1178 aa2.43□□□□□ -2.02
YHR214C-BYHR214C-B TAF8Q03750 510 aa2.42□□□□□ -2.02
YHR214C-BYHR214C-B ABP1P15891 592 aaKnown RBP2.42□□□□□ -2.02
YHR214C-BYHR214C-B BUD3P25558 1636 aa2.42□□□□□ -2.02
YHR214C-BYHR214C-B DRS2P39524 1355 aa2.42□□□□□ -2.02
YHR214C-BYHR214C-B YMR196WQ04336 1088 aa2.41□□□□□ -2.02
YHR214C-BYHR214C-B HSL1P34244 1518 aa2.41□□□□□ -2.02
YHR214C-BYHR214C-B CLB5P30283 435 aa2.41□□□□□ -2.02
YHR214C-BYHR214C-B HUL5P53119 910 aa2.41□□□□□ -2.02
YHR214C-BYHR214C-B SSN2P38931 1420 aa2.41□□□□□ -2.02
YHR214C-BYHR214C-B SUP35P05453 685 aaKnown RBP2.41□□□□□ -2.02
YHR214C-BYHR214C-B PRP40P33203 583 aaKnown RBP2.41□□□□□ -2.02
YHR214C-BYHR214C-B COG8Q04632 607 aa2.41□□□□□ -2.02
YHR214C-BYHR214C-B TRM732Q03496 1420 aa2.41□□□□□ -2.02
YHR214C-BYHR214C-B FPR3P38911 411 aaKnown RBP2.41□□□□□ -2.02
YHR214C-BYHR214C-B GEA2P39993 1459 aaKnown RBP2.41□□□□□ -2.02
YHR214C-BYHR214C-B STU1P38198 1513 aa2.4□□□□□ -2.02
YHR214C-BYHR214C-B CSE1P33307 960 aa2.4□□□□□ -2.03
YHR214C-BYHR214C-B CHD1P32657 1468 aa2.4□□□□□ -2.03
YHR214C-BYHR214C-B LTE1P07866 1435 aa2.4□□□□□ -2.03
YHR214C-BYHR214C-B SIN3P22579 1536 aa2.39□□□□□ -2.03
YHR214C-BYHR214C-B TIF4632P39936 914 aaKnown RBP2.39□□□□□ -2.03
YHR214C-BYHR214C-B RTF1P53064 558 aa2.39□□□□□ -2.03
YHR214C-BYHR214C-B ESC1Q03661 1658 aaKnown RBP2.39□□□□□ -2.03
YHR214C-BYHR214C-B ASF1P32447 279 aa2.39□□□□□ -2.03
YHR214C-BYHR214C-B FPR4Q06205 392 aaPredicted RBP2.39□□□□□ -2.03
YHR214C-BYHR214C-B REV3P14284 1504 aa2.39□□□□□ -2.03
YHR214C-BYHR214C-B RPS9AO13516 197 aaKnown RBP2.38□□□□□ -2.03
YHR214C-BYHR214C-B YAF9P53930 226 aa2.38□□□□□ -2.03
YHR214C-BYHR214C-B SKI3P17883 1432 aaKnown RBP2.38□□□□□ -2.03
YHR214C-BYHR214C-B PRI1P10363 409 aa2.38□□□□□ -2.03
YHR214C-BYHR214C-B PSK1P31374 1356 aa2.38□□□□□ -2.03
YHR214C-BYHR214C-B MDS3P53094 1487 aa2.37□□□□□ -2.03
YHR214C-BYHR214C-B PES4P39684 611 aa2.37□□□□□ -2.03
YHR214C-BYHR214C-B MDG1P53885 366 aa2.37□□□□□ -2.03
YHR214C-BYHR214C-B BPT1P14772 1559 aa2.37□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms