Protein–RNA interactions for Protein: P36100

TFA1, Transcription initiation factor IIE subunit alpha, yeastyeast

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TFA1P36100 NUP145YGL092W 3954 nt3.16□□□□□ -1.9
TFA1P36100 RPS26AYGL189C 360 nt3.15□□□□□ -1.91
TFA1P36100 YBR200W-AYBR200W-A 165 nt3.15□□□□□ -1.91
TFA1P36100 UBP2YOR124C 3819 nt3.15□□□□□ -1.91
TFA1P36100 CLU1YMR012W 3834 nt3.14□□□□□ -1.91
TFA1P36100 SEC3YER008C 4011 nt3.14□□□□□ -1.91
TFA1P36100 YOR055WYOR055W 435 nt3.13□□□□□ -1.91
TFA1P36100 BST1YFL025C 3090 nt3.08□□□□□ -1.92
TFA1P36100 SEC16YPL085W 6588 nt3.08□□□□□ -1.92
TFA1P36100 SEC8YPR055W 3198 nt3.07□□□□□ -1.92
TFA1P36100 PKH3YDR466W 2697 nt3.06□□□□□ -1.92
TFA1P36100 YOL164W-AYOL164W-A 183 nt3.06□□□□□ -1.92
TFA1P36100 YBR196C-AYBR196C-A 150 nt3.06□□□□□ -1.92
TFA1P36100 GEA2YEL022W 4380 nt3.05□□□□□ -1.92
TFA1P36100 SGS1YMR190C 4344 nt3.04□□□□□ -1.92
TFA1P36100 YMR045CYMR045C 5268 nt3.04□□□□□ -1.92
TFA1P36100 DNF1YER166W 4716 nt3.02□□□□□ -1.93
TFA1P36100 SCD5YOR329C 2619 nt3.02□□□□□ -1.93
TFA1P36100 AZF1YOR113W 2745 nt3.01□□□□□ -1.93
TFA1P36100 TRM732YMR259C 4263 nt3.01□□□□□ -1.93
TFA1P36100 YGR240C-AYGR240C-A 201 nt3.01□□□□□ -1.93
TFA1P36100 MON2YNL297C 4911 nt3.01□□□□□ -1.93
TFA1P36100 UTP22YGR090W 3714 nt2.99□□□□□ -1.93
TFA1P36100 YBL100W-CYBL100W-C 120 nt2.99□□□□□ -1.93
TFA1P36100 BEM3YPL115C 3387 nt2.99□□□□□ -1.93
TFA1P36100 DNA2YHR164C 4569 nt2.98□□□□□ -1.93
TFA1P36100 PRP16YKR086W 3216 nt2.96□□□□□ -1.94
TFA1P36100 NNF2YGR089W 2811 nt2.96□□□□□ -1.94
TFA1P36100 YLR399W-AYLR399W-A 105 nt2.96□□□□□ -1.94
TFA1P36100 MSB1YOR188W 3414 nt2.95□□□□□ -1.94
TFA1P36100 TOR2YKL203C 7425 nt2.95□□□□□ -1.94
TFA1P36100 SEC10YLR166C 2616 nt2.94□□□□□ -1.94
TFA1P36100 MSN5YDR335W 3675 nt2.92□□□□□ -1.94
TFA1P36100 YLR286W-AYLR286W-A 135 nt2.92□□□□□ -1.94
TFA1P36100 UBP3YER151C 2739 nt2.91□□□□□ -1.94
TFA1P36100 EST2YLR318W 2655 nt2.9□□□□□ -1.94
TFA1P36100 PIK1YNL267W 3201 nt2.9□□□□□ -1.95
TFA1P36100 GLG1YKR058W 1851 nt2.88□□□□□ -1.95
TFA1P36100 YSP1YHR155W 3687 nt2.87□□□□□ -1.95
TFA1P36100 NUP188YML103C 4968 nt2.86□□□□□ -1.95
TFA1P36100 TFC3YAL001C 3483 nt2.86□□□□□ -1.95
TFA1P36100 ORC3YLL004W 1851 nt2.86□□□□□ -1.95
TFA1P36100 tN(GUU)QtN(GUU)Q 71 nt2.84□□□□□ -1.95
TFA1P36100 snR53snR53 91 nt2.84□□□□□ -1.95
TFA1P36100 YPR160W-AYPR160W-A 81 nt2.83□□□□□ -1.96
TFA1P36100 PMD1YER132C 5262 nt2.82□□□□□ -1.96
TFA1P36100 NEO1YIL048W 3456 nt2.81□□□□□ -1.96
TFA1P36100 snR47snR47 99 nt2.81□□□□□ -1.96
TFA1P36100 DGR1YNL130C-A 147 nt2.79□□□□□ -1.96
TFA1P36100 IRC20YLR247C 4671 nt2.78□□□□□ -1.96
TFA1P36100 CFT1YDR301W 4074 nt2.77□□□□□ -1.97
TFA1P36100 MSH3YCR092C 3057 nt2.75□□□□□ -1.97
TFA1P36100 CDC39YCR093W 6327 nt2.75□□□□□ -1.97
TFA1P36100 ULP2YIL031W 3105 nt2.75□□□□□ -1.97
TFA1P36100 NUP170YBL079W 4509 nt2.74□□□□□ -1.97
TFA1P36100 SXM1YDR395W 2835 nt2.74□□□□□ -1.97
TFA1P36100 FKS1YLR342W 5631 nt2.72□□□□□ -1.97
TFA1P36100 YPL060C-AYPL060C-A 3315 nt2.72□□□□□ -1.97
TFA1P36100 BRE1YDL074C 2103 nt2.72□□□□□ -1.97
TFA1P36100 PEP1YBL017C 4740 nt2.71□□□□□ -1.98
TFA1P36100 snR64snR64 101 nt2.68□□□□□ -1.98
TFA1P36100 tD(GUC)QtD(GUC)Q 75 nt2.67□□□□□ -1.98
TFA1P36100 SPP41YDR464W 4308 nt2.66□□□□□ -1.98
TFA1P36100 ANS1YHR126C 480 nt2.65□□□□□ -1.99
TFA1P36100 YOR093CYOR093C 4947 nt2.65□□□□□ -1.99
TFA1P36100 tT(UGU)HtT(UGU)H 72 nt2.6□□□□□ -1.99
TFA1P36100 EST1YLR233C 2100 nt2.59□□□□□ -1.99
TFA1P36100 BRR2YER172C 6492 nt2.57□□□□□ -2
TFA1P36100 REV3YPL167C 4515 nt2.57□□□□□ -2
TFA1P36100 VPS15YBR097W 4365 nt2.56□□□□□ -2
TFA1P36100 YLR299C-AYLR299C-A 93 nt2.56□□□□□ -2
TFA1P36100 YMR247W-AYMR247W-A 144 nt2.54□□□□□ -2
TFA1P36100 snR69snR69 101 nt2.53□□□□□ -2
TFA1P36100 FAB1YFR019W 6837 nt2.51□□□□□ -2.01
TFA1P36100 PET127YOR017W 2403 nt2.5□□□□□ -2.01
TFA1P36100 YHR214C-BYHR214C-B 5382 nt2.5□□□□□ -2.01
TFA1P36100 CSE1YGL238W 2883 nt2.49□□□□□ -2.01
TFA1P36100 NST1YNL091W 3723 nt2.49□□□□□ -2.01
TFA1P36100 YDL159C-BYDL159C-B 177 nt2.47□□□□□ -2.01
TFA1P36100 YDR371C-AYDR371C-A 105 nt2.46□□□□□ -2.02
TFA1P36100 YKL225WYKL225W 348 nt2.44□□□□□ -2.02
TFA1P36100 IRA1YBR140C 9279 nt2.44□□□□□ -2.02
TFA1P36100 LAA1YJL207C 6045 nt2.41□□□□□ -2.02
TFA1P36100 RDS3YPR094W 324 nt2.4□□□□□ -2.03
TFA1P36100 snR50snR50 90 nt2.4□□□□□ -2.03
TFA1P36100 YGR130CYGR130C 2451 nt2.39□□□□□ -2.03
TFA1P36100 MEC1YBR136W 7107 nt2.37□□□□□ -2.03
TFA1P36100 HUG1YML058W-A 207 nt2.37□□□□□ -2.03
TFA1P36100 YLL006W-AYLL006W-A 177 nt2.36□□□□□ -2.03
TFA1P36100 YBR109W-AYBR109W-A 225 nt2.35□□□□□ -2.03
TFA1P36100 SSK2YNR031C 4740 nt2.33□□□□□ -2.04
TFA1P36100 YML054C-AYML054C-A 159 nt2.31□□□□□ -2.04
TFA1P36100 SPT7YBR081C 3999 nt2.31□□□□□ -2.04
TFA1P36100 YMR272W-BYMR272W-B 108 nt2.3□□□□□ -2.04
TFA1P36100 SPC110YDR356W 2835 nt2.3□□□□□ -2.04
TFA1P36100 DNF3YMR162C 4971 nt2.3□□□□□ -2.04
TFA1P36100 NIP1YMR309C 2439 nt2.27□□□□□ -2.05
TFA1P36100 YHR180C-BYHR180C-B 105 nt2.25□□□□□ -2.05
TFA1P36100 snR38snR38 95 nt2.25□□□□□ -2.05
TFA1P36100 FYV8YGR196C 2454 nt2.24□□□□□ -2.05
Retrieved 100 of 7,029 protein–RNA pairs in 30.3 ms