RNA–Protein interactions for RNA: YMR162C

DNF3, Transcript of Trans-golgi network aminophospholipid translocase (flippase), yeastyeast

Gene DNF3, Length 4,971 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DNF3YMR162C INO80P53115 1489 aa3.25□□□□□ -1.89
DNF3YMR162C MON2P48563 1636 aaPredicted RBP3.22□□□□□ -1.89
DNF3YMR162C KOG1P38873 1557 aa3.11□□□□□ -1.91
DNF3YMR162C RSE1Q04693 1361 aaKnown RBP3.1□□□□□ -1.91
DNF3YMR162C DNA2P38859 1522 aa3.02□□□□□ -1.93
DNF3YMR162C TCB3Q03640 1545 aaKnown RBP3.02□□□□□ -1.93
DNF3YMR162C MTC1P47018 478 aaKnown RBP2.99□□□□□ -1.93
DNF3YMR162C SWR1Q05471 1514 aa2.99□□□□□ -1.93
DNF3YMR162C SPA2P23201 1466 aaKnown RBP2.93□□□□□ -1.94
DNF3YMR162C MIF2P35201 549 aa2.9□□□□□ -1.95
DNF3YMR162C TY1B-DR4Q07793 1604 aa2.88□□□□□ -1.95
DNF3YMR162C THO2P53552 1597 aaKnown RBP2.85□□□□□ -1.95
DNF3YMR162C BUD4P47136 1447 aa2.81□□□□□ -1.96
DNF3YMR162C SPT6P23615 1451 aaKnown RBP2.79□□□□□ -1.96
DNF3YMR162C REV3P14284 1504 aa2.78□□□□□ -1.96
DNF3YMR162C ECM5Q03214 1411 aa2.76□□□□□ -1.97
DNF3YMR162C MDS3P53094 1487 aa2.76□□□□□ -1.97
DNF3YMR162C HSL1P34244 1518 aa2.75□□□□□ -1.97
DNF3YMR162C SGS1P35187 1447 aa2.75□□□□□ -1.97
DNF3YMR162C SSK2P53599 1579 aa2.74□□□□□ -1.97
DNF3YMR162C BPT1P14772 1559 aa2.73□□□□□ -1.97
DNF3YMR162C LTE1P07866 1435 aa2.73□□□□□ -1.97
DNF3YMR162C PEP1P32319 1579 aa2.71□□□□□ -1.98
DNF3YMR162C SCT1P32784 759 aa2.71□□□□□ -1.98
DNF3YMR162C MET5P47169 1442 aa2.7□□□□□ -1.98
DNF3YMR162C YCF1P39109 1515 aaKnown RBP2.69□□□□□ -1.98
DNF3YMR162C GEA2P39993 1459 aaKnown RBP2.68□□□□□ -1.98
DNF3YMR162C HIR3P47171 1648 aa2.68□□□□□ -1.98
DNF3YMR162C YFR006WP43590 535 aa2.68□□□□□ -1.98
DNF3YMR162C ESC1Q03661 1658 aaKnown RBP2.67□□□□□ -1.98
DNF3YMR162C MYO2P19524 1574 aaKnown RBP2.67□□□□□ -1.98
DNF3YMR162C DNF1P32660 1571 aa2.67□□□□□ -1.98
DNF3YMR162C ABP1P15891 592 aaKnown RBP2.66□□□□□ -1.98
DNF3YMR162C SIN3P22579 1536 aa2.64□□□□□ -1.99
DNF3YMR162C TAF2P23255 1407 aa2.64□□□□□ -1.99
DNF3YMR162C DRS2P39524 1355 aa2.61□□□□□ -1.99
DNF3YMR162C RPA190P10964 1664 aaKnown RBP2.61□□□□□ -1.99
DNF3YMR162C XRN1P22147 1528 aaKnown RBP2.61□□□□□ -1.99
DNF3YMR162C MMS1Q06211 1407 aa2.61□□□□□ -1.99
DNF3YMR162C NSR1P27476 414 aaKnown RBP RIP-Chip data2.6□□□□□ -1.99not detected
DNF3YMR162C RKR1Q04781 1562 aa2.6□□□□□ -1.99
DNF3YMR162C ATG2P53855 1592 aa2.6□□□□□ -1.99
DNF3YMR162C CDC25P04821 1589 aa2.6□□□□□ -1.99
DNF3YMR162C SKI3P17883 1432 aaKnown RBP2.59□□□□□ -1.99
DNF3YMR162C ESP1Q03018 1630 aa2.59□□□□□ -2
DNF3YMR162C BFR2Q06631 534 aaKnown RBP2.58□□□□□ -2
DNF3YMR162C TRM732Q03496 1420 aa2.56□□□□□ -2
DNF3YMR162C NAP1P25293 417 aaKnown RBP2.56□□□□□ -2
DNF3YMR162C YTA7P40340 1379 aa2.55□□□□□ -2
DNF3YMR162C URN1Q06525 465 aaKnown RBP2.55□□□□□ -2
DNF3YMR162C CHD1P32657 1468 aa2.55□□□□□ -2
DNF3YMR162C RPO31P04051 1460 aa2.55□□□□□ -2
DNF3YMR162C TRM3Q07527 1436 aa2.55□□□□□ -2
DNF3YMR162C IRC20Q06554 1556 aa2.54□□□□□ -2
DNF3YMR162C UFD4P33202 1483 aa2.54□□□□□ -2
DNF3YMR162C YPK9Q12697 1472 aa2.54□□□□□ -2
DNF3YMR162C RQC2Q12532 1038 aaKnown RBP2.54□□□□□ -2
DNF3YMR162C PAN1P32521 1480 aa2.54□□□□□ -2
DNF3YMR162C YOR093CQ12275 1648 aa2.54□□□□□ -2
DNF3YMR162C VPS15P22219 1454 aa2.51□□□□□ -2.01
DNF3YMR162C TAF7Q05021 590 aa2.51□□□□□ -2.01
DNF3YMR162C SCC2Q04002 1493 aa2.51□□□□□ -2.01
DNF3YMR162C ITT1Q04638 464 aa2.5□□□□□ -2.01
DNF3YMR162C NUP170P38181 1502 aa2.5□□□□□ -2.01
DNF3YMR162C TOP2P06786 1428 aaKnown RBP2.5□□□□□ -2.01
DNF3YMR162C MMS22Q06164 1454 aa2.5□□□□□ -2.01
DNF3YMR162C BUD3P25558 1636 aa2.49□□□□□ -2.01
DNF3YMR162C DNF2Q12675 1612 aa2.49□□□□□ -2.01
DNF3YMR162C NUP159P40477 1460 aa2.49□□□□□ -2.01
DNF3YMR162C BNI1P41832 1953 aa2.48□□□□□ -2.01
DNF3YMR162C SAS10Q12136 610 aaPredicted RBP2.48□□□□□ -2.01
DNF3YMR162C DRS1P32892 752 aaKnown RBP2.46□□□□□ -2.02
DNF3YMR162C STH1P32597 1359 aa2.46□□□□□ -2.02
DNF3YMR162C BNR1P40450 1375 aa2.46□□□□□ -2.02
DNF3YMR162C SMC4Q12267 1418 aa2.46□□□□□ -2.02
DNF3YMR162C RTT106P40161 455 aa2.45□□□□□ -2.02
DNF3YMR162C NTE1Q04958 1679 aa2.45□□□□□ -2.02
DNF3YMR162C SNT2P53127 1403 aa2.44□□□□□ -2.02
DNF3YMR162C MYO4P32492 1471 aa2.44□□□□□ -2.02
DNF3YMR162C SSN2P38931 1420 aa2.44□□□□□ -2.02
DNF3YMR162C YMR196WQ04336 1088 aa2.44□□□□□ -2.02
DNF3YMR162C MET10P39692 1035 aa2.43□□□□□ -2.02
DNF3YMR162C STU1P38198 1513 aa2.43□□□□□ -2.02
DNF3YMR162C DOP1Q03921 1698 aa2.43□□□□□ -2.02
DNF3YMR162C UBP1P25037 809 aa2.43□□□□□ -2.02
DNF3YMR162C PRI1P10363 409 aa2.43□□□□□ -2.02
DNF3YMR162C SPP41P38904 1435 aa2.43□□□□□ -2.02
DNF3YMR162C LEU3P08638 886 aa2.42□□□□□ -2.02
DNF3YMR162C ULS1Q08562 1619 aa2.42□□□□□ -2.02
DNF3YMR162C EDE1P34216 1381 aa2.41□□□□□ -2.02
DNF3YMR162C IQG1Q12280 1495 aa2.41□□□□□ -2.02
DNF3YMR162C PAF1P38351 445 aa2.41□□□□□ -2.02
DNF3YMR162C YJL181WP46987 611 aa2.41□□□□□ -2.02
DNF3YMR162C TY1B-BRQ12193 1756 aa2.41□□□□□ -2.02
DNF3YMR162C TY1B-GR3Q12316 1755 aa2.41□□□□□ -2.02
DNF3YMR162C TY1B-ORQ92393 1755 aa2.41□□□□□ -2.02
DNF3YMR162C PDR10P51533 1564 aa2.41□□□□□ -2.02
DNF3YMR162C SPO14P36126 1683 aa2.41□□□□□ -2.02
DNF3YMR162C TSC11P40061 1430 aa2.4□□□□□ -2.02
DNF3YMR162C RPO21P04050 1733 aaKnown RBP2.4□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms