Protein–RNA interactions for Protein: Q9Y282

ERGIC3, Endoplasmic reticulum-Golgi intermediate compartment protein 3, humanhuman

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3Q9Y282 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
ERGIC3Q9Y282 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ERGIC3Q9Y282 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ERGIC3Q9Y282 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
ERGIC3Q9Y282 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
ERGIC3Q9Y282 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ERGIC3Q9Y282 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.22■□□□□ 0.51
ERGIC3Q9Y282 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ERGIC3Q9Y282 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ERGIC3Q9Y282 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ERGIC3Q9Y282 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ERGIC3Q9Y282 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ERGIC3Q9Y282 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.22■□□□□ 0.51
ERGIC3Q9Y282 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ERGIC3Q9Y282 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ERGIC3Q9Y282 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ERGIC3Q9Y282 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ERGIC3Q9Y282 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.22■□□□□ 0.51
ERGIC3Q9Y282 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
ERGIC3Q9Y282 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
ERGIC3Q9Y282 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ERGIC3Q9Y282 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
ERGIC3Q9Y282 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ERGIC3Q9Y282 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.22■□□□□ 0.51
ERGIC3Q9Y282 FZD10-202ENST00000539839 3282 ntBASIC18.22■□□□□ 0.51
ERGIC3Q9Y282 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ERGIC3Q9Y282 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
ERGIC3Q9Y282 AC020763.4-201ENST00000623414 4170 ntBASIC18.21■□□□□ 0.51
ERGIC3Q9Y282 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
ERGIC3Q9Y282 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC18.21■□□□□ 0.51
ERGIC3Q9Y282 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ERGIC3Q9Y282 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
ERGIC3Q9Y282 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ERGIC3Q9Y282 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ERGIC3Q9Y282 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ERGIC3Q9Y282 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ERGIC3Q9Y282 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
ERGIC3Q9Y282 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ERGIC3Q9Y282 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC18.21■□□□□ 0.51
ERGIC3Q9Y282 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.21■□□□□ 0.51
ERGIC3Q9Y282 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
ERGIC3Q9Y282 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.21■□□□□ 0.51
ERGIC3Q9Y282 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.21■□□□□ 0.51
ERGIC3Q9Y282 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
ERGIC3Q9Y282 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.21■□□□□ 0.51
ERGIC3Q9Y282 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.21■□□□□ 0.51
ERGIC3Q9Y282 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
ERGIC3Q9Y282 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.21■□□□□ 0.5
ERGIC3Q9Y282 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
ERGIC3Q9Y282 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
ERGIC3Q9Y282 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
ERGIC3Q9Y282 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ERGIC3Q9Y282 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.2■□□□□ 0.5
ERGIC3Q9Y282 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ERGIC3Q9Y282 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ERGIC3Q9Y282 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ERGIC3Q9Y282 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ERGIC3Q9Y282 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
ERGIC3Q9Y282 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ERGIC3Q9Y282 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.2■□□□□ 0.5
ERGIC3Q9Y282 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
ERGIC3Q9Y282 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ERGIC3Q9Y282 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ERGIC3Q9Y282 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ERGIC3Q9Y282 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.2■□□□□ 0.5
ERGIC3Q9Y282 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
ERGIC3Q9Y282 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
ERGIC3Q9Y282 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
ERGIC3Q9Y282 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ERGIC3Q9Y282 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ERGIC3Q9Y282 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ERGIC3Q9Y282 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.2■□□□□ 0.5
ERGIC3Q9Y282 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ERGIC3Q9Y282 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ERGIC3Q9Y282 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
ERGIC3Q9Y282 TMEM179-206ENST00000616017 1645 ntBASIC18.2■□□□□ 0.5
ERGIC3Q9Y282 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.19■□□□□ 0.5
ERGIC3Q9Y282 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ERGIC3Q9Y282 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ERGIC3Q9Y282 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.19■□□□□ 0.5
ERGIC3Q9Y282 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
ERGIC3Q9Y282 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ERGIC3Q9Y282 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ERGIC3Q9Y282 AC005224.4-201ENST00000583262 1652 ntBASIC18.19■□□□□ 0.5
ERGIC3Q9Y282 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
ERGIC3Q9Y282 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ERGIC3Q9Y282 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ERGIC3Q9Y282 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
ERGIC3Q9Y282 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC18.19■□□□□ 0.5
ERGIC3Q9Y282 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.19■□□□□ 0.5
ERGIC3Q9Y282 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.19■□□□□ 0.5
ERGIC3Q9Y282 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ERGIC3Q9Y282 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ERGIC3Q9Y282 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ERGIC3Q9Y282 PCDHB18P-201ENST00000524813 2368 ntBASIC18.19■□□□□ 0.5
ERGIC3Q9Y282 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
ERGIC3Q9Y282 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
ERGIC3Q9Y282 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.19■□□□□ 0.5
ERGIC3Q9Y282 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
ERGIC3Q9Y282 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms