Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RNF41Q9H4P4 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC23.65■■□□□ 1.38
RNF41Q9H4P4 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC23.65■■□□□ 1.38
RNF41Q9H4P4 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC23.65■■□□□ 1.38
RNF41Q9H4P4 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
RNF41Q9H4P4 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RNF41Q9H4P4 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
RNF41Q9H4P4 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC23.64■■□□□ 1.38
RNF41Q9H4P4 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
RNF41Q9H4P4 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
RNF41Q9H4P4 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
RNF41Q9H4P4 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RNF41Q9H4P4 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
RNF41Q9H4P4 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RNF41Q9H4P4 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RNF41Q9H4P4 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC23.64■■□□□ 1.37
RNF41Q9H4P4 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC23.64■■□□□ 1.37
RNF41Q9H4P4 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
RNF41Q9H4P4 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC23.64■■□□□ 1.37
RNF41Q9H4P4 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
RNF41Q9H4P4 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC23.64■■□□□ 1.37
RNF41Q9H4P4 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC23.64■■□□□ 1.37
RNF41Q9H4P4 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
RNF41Q9H4P4 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RNF41Q9H4P4 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC23.64■■□□□ 1.37
RNF41Q9H4P4 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
RNF41Q9H4P4 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
RNF41Q9H4P4 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC23.64■■□□□ 1.37
RNF41Q9H4P4 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
RNF41Q9H4P4 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
RNF41Q9H4P4 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC23.63■■□□□ 1.37
RNF41Q9H4P4 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RNF41Q9H4P4 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
RNF41Q9H4P4 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC23.63■■□□□ 1.37
RNF41Q9H4P4 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RNF41Q9H4P4 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC23.63■■□□□ 1.37
RNF41Q9H4P4 POM121L13P-201ENST00000422362 380 ntBASIC23.63■■□□□ 1.37
RNF41Q9H4P4 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC23.63■■□□□ 1.37
RNF41Q9H4P4 KLF2-202ENST00000592003 564 ntTSL 3 BASIC23.63■■□□□ 1.37
RNF41Q9H4P4 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC23.63■■□□□ 1.37
RNF41Q9H4P4 BX119927.1-201ENST00000636596 1552 ntBASIC23.63■■□□□ 1.37
RNF41Q9H4P4 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC23.63■■□□□ 1.37
RNF41Q9H4P4 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC23.63■■□□□ 1.37
RNF41Q9H4P4 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
RNF41Q9H4P4 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RNF41Q9H4P4 LINC01521-201ENST00000504184 1943 ntBASIC23.63■■□□□ 1.37
RNF41Q9H4P4 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RNF41Q9H4P4 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC23.62■■□□□ 1.37
RNF41Q9H4P4 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC23.62■■□□□ 1.37
RNF41Q9H4P4 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
RNF41Q9H4P4 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RNF41Q9H4P4 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RNF41Q9H4P4 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC23.62■■□□□ 1.37
RNF41Q9H4P4 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
RNF41Q9H4P4 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
RNF41Q9H4P4 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC23.62■■□□□ 1.37
RNF41Q9H4P4 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
RNF41Q9H4P4 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RNF41Q9H4P4 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
RNF41Q9H4P4 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC23.62■■□□□ 1.37
RNF41Q9H4P4 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
RNF41Q9H4P4 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
RNF41Q9H4P4 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RNF41Q9H4P4 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC23.62■■□□□ 1.37
RNF41Q9H4P4 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
RNF41Q9H4P4 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RNF41Q9H4P4 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
RNF41Q9H4P4 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RNF41Q9H4P4 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RNF41Q9H4P4 KRT17P3-201ENST00000420566 1262 ntBASIC23.61■■□□□ 1.37
RNF41Q9H4P4 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
RNF41Q9H4P4 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC23.61■■□□□ 1.37
RNF41Q9H4P4 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC23.61■■□□□ 1.37
RNF41Q9H4P4 MAX-217ENST00000557277 728 ntTSL 3 BASIC23.61■■□□□ 1.37
RNF41Q9H4P4 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC23.61■■□□□ 1.37
RNF41Q9H4P4 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
RNF41Q9H4P4 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
RNF41Q9H4P4 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
RNF41Q9H4P4 CD37-204ENST00000535669 1674 ntTSL 2 BASIC23.6■■□□□ 1.37
RNF41Q9H4P4 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RNF41Q9H4P4 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
RNF41Q9H4P4 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC23.6■■□□□ 1.37
RNF41Q9H4P4 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
RNF41Q9H4P4 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
RNF41Q9H4P4 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
RNF41Q9H4P4 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC23.6■■□□□ 1.37
RNF41Q9H4P4 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
RNF41Q9H4P4 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC23.6■■□□□ 1.37
RNF41Q9H4P4 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
RNF41Q9H4P4 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
RNF41Q9H4P4 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC23.6■■□□□ 1.37
RNF41Q9H4P4 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC23.6■■□□□ 1.37
RNF41Q9H4P4 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC23.6■■□□□ 1.37
RNF41Q9H4P4 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
RNF41Q9H4P4 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC23.6■■□□□ 1.37
RNF41Q9H4P4 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC23.6■■□□□ 1.37
RNF41Q9H4P4 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC23.6■■□□□ 1.37
RNF41Q9H4P4 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC23.59■■□□□ 1.37
RNF41Q9H4P4 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
RNF41Q9H4P4 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms