Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRAM1L1Q8N609 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
TRAM1L1Q8N609 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRAM1L1Q8N609 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.83■□□□□ 0.76
TRAM1L1Q8N609 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
TRAM1L1Q8N609 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TRAM1L1Q8N609 BX119927.1-201ENST00000636596 1552 ntBASIC19.83■□□□□ 0.76
TRAM1L1Q8N609 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAM1L1Q8N609 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.82■□□□□ 0.76
TRAM1L1Q8N609 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.82■□□□□ 0.76
TRAM1L1Q8N609 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.82■□□□□ 0.76
TRAM1L1Q8N609 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.82■□□□□ 0.76
TRAM1L1Q8N609 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
TRAM1L1Q8N609 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAM1L1Q8N609 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
TRAM1L1Q8N609 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
TRAM1L1Q8N609 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRAM1L1Q8N609 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAM1L1Q8N609 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAM1L1Q8N609 POM121L13P-201ENST00000422362 380 ntBASIC19.82■□□□□ 0.76
TRAM1L1Q8N609 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.82■□□□□ 0.76
TRAM1L1Q8N609 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.82■□□□□ 0.76
TRAM1L1Q8N609 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAM1L1Q8N609 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAM1L1Q8N609 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.82■□□□□ 0.76
TRAM1L1Q8N609 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRAM1L1Q8N609 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAM1L1Q8N609 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAM1L1Q8N609 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRAM1L1Q8N609 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAM1L1Q8N609 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
TRAM1L1Q8N609 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRAM1L1Q8N609 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.81■□□□□ 0.76
TRAM1L1Q8N609 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAM1L1Q8N609 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
TRAM1L1Q8N609 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.81■□□□□ 0.76
TRAM1L1Q8N609 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAM1L1Q8N609 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAM1L1Q8N609 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.81■□□□□ 0.76
TRAM1L1Q8N609 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.81■□□□□ 0.76
TRAM1L1Q8N609 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.81■□□□□ 0.76
TRAM1L1Q8N609 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.81■□□□□ 0.76
TRAM1L1Q8N609 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAM1L1Q8N609 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.81■□□□□ 0.76
TRAM1L1Q8N609 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAM1L1Q8N609 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRAM1L1Q8N609 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.81■□□□□ 0.76
TRAM1L1Q8N609 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAM1L1Q8N609 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAM1L1Q8N609 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAM1L1Q8N609 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAM1L1Q8N609 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.81■□□□□ 0.76
TRAM1L1Q8N609 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAM1L1Q8N609 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.8■□□□□ 0.76
TRAM1L1Q8N609 LINC01521-201ENST00000504184 1943 ntBASIC19.8■□□□□ 0.76
TRAM1L1Q8N609 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAM1L1Q8N609 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAM1L1Q8N609 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
TRAM1L1Q8N609 ABHD17AP1-201ENST00000358206 933 ntBASIC19.8■□□□□ 0.76
TRAM1L1Q8N609 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRAM1L1Q8N609 KRT17P3-201ENST00000420566 1262 ntBASIC19.8■□□□□ 0.76
TRAM1L1Q8N609 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAM1L1Q8N609 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.8■□□□□ 0.76
TRAM1L1Q8N609 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.8■□□□□ 0.76
TRAM1L1Q8N609 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.8■□□□□ 0.76
TRAM1L1Q8N609 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAM1L1Q8N609 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAM1L1Q8N609 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAM1L1Q8N609 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRAM1L1Q8N609 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRAM1L1Q8N609 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
TRAM1L1Q8N609 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.79■□□□□ 0.76
TRAM1L1Q8N609 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAM1L1Q8N609 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRAM1L1Q8N609 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.79■□□□□ 0.76
TRAM1L1Q8N609 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
TRAM1L1Q8N609 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.79■□□□□ 0.76
TRAM1L1Q8N609 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAM1L1Q8N609 RPS2P52-201ENST00000469610 820 ntBASIC19.79■□□□□ 0.76
TRAM1L1Q8N609 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.79■□□□□ 0.76
TRAM1L1Q8N609 AC006058.3-201ENST00000606217 1069 ntBASIC19.79■□□□□ 0.76
TRAM1L1Q8N609 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.79■□□□□ 0.76
TRAM1L1Q8N609 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
TRAM1L1Q8N609 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
TRAM1L1Q8N609 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
TRAM1L1Q8N609 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
TRAM1L1Q8N609 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.79■□□□□ 0.76
TRAM1L1Q8N609 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.79■□□□□ 0.76
TRAM1L1Q8N609 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.79■□□□□ 0.76
TRAM1L1Q8N609 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
TRAM1L1Q8N609 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.79■□□□□ 0.76
TRAM1L1Q8N609 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAM1L1Q8N609 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAM1L1Q8N609 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRAM1L1Q8N609 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.78■□□□□ 0.76
TRAM1L1Q8N609 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
TRAM1L1Q8N609 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAM1L1Q8N609 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAM1L1Q8N609 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAM1L1Q8N609 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms