Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 TPM4P1-201ENST00000436100 807 ntBASIC12.45□□□□□ -0.42
VPS13BQ7Z7G8 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC12.45□□□□□ -0.42
VPS13BQ7Z7G8 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
VPS13BQ7Z7G8 LSR-203ENST00000360798 1963 ntTSL 2 BASIC12.45□□□□□ -0.42
VPS13BQ7Z7G8 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
VPS13BQ7Z7G8 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
VPS13BQ7Z7G8 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VPS13BQ7Z7G8 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VPS13BQ7Z7G8 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC12.45□□□□□ -0.42
VPS13BQ7Z7G8 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
VPS13BQ7Z7G8 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
VPS13BQ7Z7G8 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC12.45□□□□□ -0.42
VPS13BQ7Z7G8 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VPS13BQ7Z7G8 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
VPS13BQ7Z7G8 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
VPS13BQ7Z7G8 AL024507.2-201ENST00000606070 2574 ntBASIC12.44□□□□□ -0.42
VPS13BQ7Z7G8 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
VPS13BQ7Z7G8 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC12.44□□□□□ -0.42
VPS13BQ7Z7G8 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VPS13BQ7Z7G8 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
VPS13BQ7Z7G8 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
VPS13BQ7Z7G8 F2R-202ENST00000505600 442 ntTSL 2 BASIC12.44□□□□□ -0.42
VPS13BQ7Z7G8 WWOX-216ENST00000569818 525 ntBASIC12.44□□□□□ -0.42
VPS13BQ7Z7G8 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC12.44□□□□□ -0.42
VPS13BQ7Z7G8 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
VPS13BQ7Z7G8 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
VPS13BQ7Z7G8 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VPS13BQ7Z7G8 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC12.44□□□□□ -0.42
VPS13BQ7Z7G8 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VPS13BQ7Z7G8 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
VPS13BQ7Z7G8 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
VPS13BQ7Z7G8 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC12.44□□□□□ -0.42
VPS13BQ7Z7G8 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC12.44□□□□□ -0.42
VPS13BQ7Z7G8 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
VPS13BQ7Z7G8 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VPS13BQ7Z7G8 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC12.44□□□□□ -0.42
VPS13BQ7Z7G8 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VPS13BQ7Z7G8 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC12.44□□□□□ -0.42
VPS13BQ7Z7G8 BET1L-202ENST00000332865 533 ntTSL 5 BASIC12.44□□□□□ -0.42
VPS13BQ7Z7G8 AC116562.2-201ENST00000507042 360 ntBASIC12.44□□□□□ -0.42
VPS13BQ7Z7G8 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC12.44□□□□□ -0.42
VPS13BQ7Z7G8 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
VPS13BQ7Z7G8 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
VPS13BQ7Z7G8 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC12.44□□□□□ -0.42
VPS13BQ7Z7G8 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC12.44□□□□□ -0.42
VPS13BQ7Z7G8 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VPS13BQ7Z7G8 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
VPS13BQ7Z7G8 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
VPS13BQ7Z7G8 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VPS13BQ7Z7G8 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC12.43□□□□□ -0.42
VPS13BQ7Z7G8 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
VPS13BQ7Z7G8 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VPS13BQ7Z7G8 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VPS13BQ7Z7G8 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC12.43□□□□□ -0.42
VPS13BQ7Z7G8 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC12.43□□□□□ -0.42
VPS13BQ7Z7G8 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC12.43□□□□□ -0.42
VPS13BQ7Z7G8 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
VPS13BQ7Z7G8 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC12.43□□□□□ -0.42
VPS13BQ7Z7G8 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC12.43□□□□□ -0.42
VPS13BQ7Z7G8 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
VPS13BQ7Z7G8 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
VPS13BQ7Z7G8 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC12.43□□□□□ -0.42
VPS13BQ7Z7G8 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VPS13BQ7Z7G8 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VPS13BQ7Z7G8 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VPS13BQ7Z7G8 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC12.43□□□□□ -0.42
VPS13BQ7Z7G8 AC026271.3-201ENST00000571884 352 ntBASIC12.43□□□□□ -0.42
VPS13BQ7Z7G8 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
VPS13BQ7Z7G8 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC12.43□□□□□ -0.42
VPS13BQ7Z7G8 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VPS13BQ7Z7G8 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VPS13BQ7Z7G8 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC12.42□□□□□ -0.42
VPS13BQ7Z7G8 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.42□□□□□ -0.42
VPS13BQ7Z7G8 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
VPS13BQ7Z7G8 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.42□□□□□ -0.42
VPS13BQ7Z7G8 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.42□□□□□ -0.42
VPS13BQ7Z7G8 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VPS13BQ7Z7G8 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC12.42□□□□□ -0.42
VPS13BQ7Z7G8 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC12.42□□□□□ -0.42
VPS13BQ7Z7G8 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
VPS13BQ7Z7G8 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
VPS13BQ7Z7G8 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC12.42□□□□□ -0.42
VPS13BQ7Z7G8 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VPS13BQ7Z7G8 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
VPS13BQ7Z7G8 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
VPS13BQ7Z7G8 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC12.42□□□□□ -0.42
VPS13BQ7Z7G8 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VPS13BQ7Z7G8 KRT16P1-201ENST00000399124 1418 ntBASIC12.42□□□□□ -0.42
VPS13BQ7Z7G8 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VPS13BQ7Z7G8 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
VPS13BQ7Z7G8 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC12.42□□□□□ -0.42
VPS13BQ7Z7G8 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC12.42□□□□□ -0.42
VPS13BQ7Z7G8 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VPS13BQ7Z7G8 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
VPS13BQ7Z7G8 FAM8A6P-201ENST00000407496 1135 ntBASIC12.42□□□□□ -0.42
VPS13BQ7Z7G8 COPS8-203ENST00000409334 794 ntTSL 5 BASIC12.42□□□□□ -0.42
VPS13BQ7Z7G8 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VPS13BQ7Z7G8 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VPS13BQ7Z7G8 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VPS13BQ7Z7G8 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms