Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MRPL54Q6P161 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
MRPL54Q6P161 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
MRPL54Q6P161 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MRPL54Q6P161 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
MRPL54Q6P161 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MRPL54Q6P161 AC018470.1-201ENST00000624790 3129 ntBASIC15.12■□□□□ 0.01
MRPL54Q6P161 HES6-204ENST00000409182 863 ntTSL 2 BASIC15.12■□□□□ 0.01
MRPL54Q6P161 AC006455.2-201ENST00000429931 906 ntBASIC15.12■□□□□ 0.01
MRPL54Q6P161 OR2I1P-207ENST00000453522 948 ntBASIC15.12■□□□□ 0.01
MRPL54Q6P161 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
MRPL54Q6P161 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MRPL54Q6P161 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
MRPL54Q6P161 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MRPL54Q6P161 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
MRPL54Q6P161 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MRPL54Q6P161 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
MRPL54Q6P161 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MRPL54Q6P161 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
MRPL54Q6P161 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MRPL54Q6P161 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MRPL54Q6P161 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
MRPL54Q6P161 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
MRPL54Q6P161 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC15.11■□□□□ 0.01
MRPL54Q6P161 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
MRPL54Q6P161 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MRPL54Q6P161 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC15.11■□□□□ 0.01
MRPL54Q6P161 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC15.11■□□□□ 0.01
MRPL54Q6P161 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MRPL54Q6P161 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC15.11■□□□□ 0.01
MRPL54Q6P161 TMEM179-206ENST00000616017 1645 ntBASIC15.11■□□□□ 0.01
MRPL54Q6P161 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MRPL54Q6P161 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
MRPL54Q6P161 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MRPL54Q6P161 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
MRPL54Q6P161 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC15.11■□□□□ 0.01
MRPL54Q6P161 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC15.11■□□□□ 0.01
MRPL54Q6P161 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
MRPL54Q6P161 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
MRPL54Q6P161 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
MRPL54Q6P161 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
MRPL54Q6P161 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC15.11■□□□□ 0.01
MRPL54Q6P161 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MRPL54Q6P161 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MRPL54Q6P161 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
MRPL54Q6P161 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
MRPL54Q6P161 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
MRPL54Q6P161 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
MRPL54Q6P161 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
MRPL54Q6P161 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
MRPL54Q6P161 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
MRPL54Q6P161 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MRPL54Q6P161 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
MRPL54Q6P161 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MRPL54Q6P161 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
MRPL54Q6P161 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC15.1■□□□□ 0.01
MRPL54Q6P161 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MRPL54Q6P161 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
MRPL54Q6P161 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC15.1■□□□□ 0.01
MRPL54Q6P161 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MRPL54Q6P161 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MRPL54Q6P161 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
MRPL54Q6P161 AC103724.3-201ENST00000564481 992 ntBASIC15.1■□□□□ 0.01
MRPL54Q6P161 MTDHP2-201ENST00000601468 714 ntBASIC15.1■□□□□ 0.01
MRPL54Q6P161 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
MRPL54Q6P161 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MRPL54Q6P161 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MRPL54Q6P161 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MRPL54Q6P161 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
MRPL54Q6P161 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC15.1■□□□□ 0.01
MRPL54Q6P161 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
MRPL54Q6P161 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MRPL54Q6P161 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC15.09■□□□□ 0.01
MRPL54Q6P161 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MRPL54Q6P161 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC15.09■□□□□ 0.01
MRPL54Q6P161 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MRPL54Q6P161 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MRPL54Q6P161 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MRPL54Q6P161 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MRPL54Q6P161 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MRPL54Q6P161 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MRPL54Q6P161 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MRPL54Q6P161 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MRPL54Q6P161 TFPT-201ENST00000391757 774 ntTSL 5 BASIC15.09■□□□□ 0.01
MRPL54Q6P161 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
MRPL54Q6P161 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MRPL54Q6P161 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC15.09■□□□□ 0.01
MRPL54Q6P161 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
MRPL54Q6P161 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MRPL54Q6P161 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MRPL54Q6P161 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
MRPL54Q6P161 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
MRPL54Q6P161 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
MRPL54Q6P161 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MRPL54Q6P161 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MRPL54Q6P161 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
MRPL54Q6P161 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MRPL54Q6P161 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC15.09■□□□□ 0.01
MRPL54Q6P161 TREX1-205ENST00000625293 1783 ntBASIC15.08■□□□□ 0.01
MRPL54Q6P161 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms