Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC9.24□□□□□ -0.93
COL15A1P39059 AC023908.2-201ENST00000558616 318 ntTSL 3 BASIC9.24□□□□□ -0.93
COL15A1P39059 AC010287.1-201ENST00000566916 357 ntBASIC9.24□□□□□ -0.93
COL15A1P39059 NUTM2B-AS1-209ENST00000596088 366 ntTSL 3 BASIC9.24□□□□□ -0.93
COL15A1P39059 AC009779.8-202ENST00000607990 932 ntBASIC9.24□□□□□ -0.93
COL15A1P39059 MIR665-201ENST00000635949 72 ntBASIC9.24□□□□□ -0.93
COL15A1P39059 EFHC1-233ENST00000637353 3829 ntTSL 5 BASIC9.24□□□□□ -0.93
COL15A1P39059 AC002115.2-201ENST00000640449 603 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
COL15A1P39059 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
COL15A1P39059 DLG1-202ENST00000357674 4931 ntAPPRIS ALT1 TSL 1 (best) BASIC9.23□□□□□ -0.93
COL15A1P39059 SEMA6A-210ENST00000510263 3292 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
COL15A1P39059 OXCT1-205ENST00000510634 1441 ntTSL 2 BASIC9.23□□□□□ -0.93
COL15A1P39059 ASCC1-201ENST00000317126 1501 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
COL15A1P39059 BMX-203ENST00000357607 2598 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
COL15A1P39059 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC9.23□□□□□ -0.93
COL15A1P39059 AC079178.2-201ENST00000439323 1624 ntBASIC9.23□□□□□ -0.93
COL15A1P39059 IL24-207ENST00000611909 1621 ntTSL 3 BASIC9.23□□□□□ -0.93
COL15A1P39059 ZNF334-201ENST00000347606 3890 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
COL15A1P39059 TSHZ2-201ENST00000329613 3093 ntTSL 4 BASIC9.23□□□□□ -0.93
COL15A1P39059 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
COL15A1P39059 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
COL15A1P39059 ZBTB40-201ENST00000374651 8368 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
COL15A1P39059 ZNF736-202ENST00000423484 7119 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
COL15A1P39059 SCG3-201ENST00000220478 3315 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
COL15A1P39059 COLGALT2-203ENST00000367521 4723 ntTSL 2 BASIC9.23□□□□□ -0.93
COL15A1P39059 CAPRIN1-209ENST00000530820 3454 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
COL15A1P39059 ABCA4-201ENST00000370225 7309 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
COL15A1P39059 ERC1-203ENST00000360905 5789 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
COL15A1P39059 MBP-206ENST00000397863 4800 ntTSL 3 BASIC9.23□□□□□ -0.93
COL15A1P39059 NOTCH2-207ENST00000602566 5046 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
COL15A1P39059 HBS1L-205ENST00000367837 7163 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
COL15A1P39059 ALMS1-204ENST00000484298 12595 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
COL15A1P39059 XIAP-202ENST00000371199 8591 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
COL15A1P39059 ABCB4-202ENST00000358400 3826 ntTSL 5 BASIC9.23□□□□□ -0.93
COL15A1P39059 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
COL15A1P39059 CNN3P1-201ENST00000401596 935 ntBASIC9.23□□□□□ -0.93
COL15A1P39059 MIR1266-201ENST00000408125 84 ntBASIC9.23□□□□□ -0.93
COL15A1P39059 AC104698.1-201ENST00000435671 276 ntBASIC9.23□□□□□ -0.93
COL15A1P39059 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC9.23□□□□□ -0.93
COL15A1P39059 STX18-IT1-201ENST00000515487 542 ntTSL 4 BASIC9.23□□□□□ -0.93
COL15A1P39059 AC025524.2-202ENST00000523042 535 ntTSL 4 BASIC9.23□□□□□ -0.93
COL15A1P39059 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC9.23□□□□□ -0.93
COL15A1P39059 AC116903.1-201ENST00000557683 539 ntTSL 4 BASIC9.23□□□□□ -0.93
COL15A1P39059 ULK4P2-202ENST00000564187 492 ntBASIC9.23□□□□□ -0.93
COL15A1P39059 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC9.23□□□□□ -0.93
COL15A1P39059 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC9.23□□□□□ -0.93
COL15A1P39059 RBMY1A3P-201ENST00000382670 1404 ntBASIC9.23□□□□□ -0.93
COL15A1P39059 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
COL15A1P39059 LIMCH1-216ENST00000512820 5071 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
COL15A1P39059 CCDC150P1-201ENST00000537123 2215 ntBASIC9.22□□□□□ -0.93
COL15A1P39059 PDE1A-201ENST00000351439 2338 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
COL15A1P39059 ZFP42-203ENST00000618147 2338 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
COL15A1P39059 ZNF544-206ENST00000596652 2818 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
COL15A1P39059 ZNF544-217ENST00000600220 2837 ntAPPRIS ALT2 TSL 3 BASIC9.22□□□□□ -0.93
COL15A1P39059 PIWIL2-204ENST00000521356 3488 ntTSL 2 BASIC9.22□□□□□ -0.93
COL15A1P39059 MAP4K4-203ENST00000347699 3792 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
COL15A1P39059 AC107884.1-207ENST00000504206 4433 ntTSL 3 BASIC9.22□□□□□ -0.93
COL15A1P39059 STAMBP-202ENST00000394070 6691 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
COL15A1P39059 DNAH9-201ENST00000262442 13750 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
COL15A1P39059 ZNF471-202ENST00000591537 5859 ntTSL 2 BASIC9.22□□□□□ -0.93
COL15A1P39059 NANOG-201ENST00000229307 5183 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
COL15A1P39059 AC002384.1-203ENST00000602761 3049 ntTSL 3 BASIC9.22□□□□□ -0.93
COL15A1P39059 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC9.22□□□□□ -0.93
COL15A1P39059 ESR1-206ENST00000427531 5436 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
COL15A1P39059 CENPL-203ENST00000367710 1771 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
COL15A1P39059 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC9.22□□□□□ -0.93
COL15A1P39059 ACTG2-203ENST00000409731 1413 ntTSL 2 BASIC9.22□□□□□ -0.93
COL15A1P39059 CYFIP1-208ENST00000617928 6793 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
COL15A1P39059 SERBP1-203ENST00000370994 6676 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
COL15A1P39059 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC9.22□□□□□ -0.93
COL15A1P39059 PPIAP22-201ENST00000358455 498 ntBASIC9.22□□□□□ -0.93
COL15A1P39059 AC092634.1-201ENST00000366505 199 ntBASIC9.22□□□□□ -0.93
COL15A1P39059 HNRNPH1P2-201ENST00000396845 1210 ntBASIC9.22□□□□□ -0.93
COL15A1P39059 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
COL15A1P39059 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
COL15A1P39059 VDAC1P10-201ENST00000416715 891 ntBASIC9.22□□□□□ -0.93
COL15A1P39059 RN7SL180P-201ENST00000466769 294 ntBASIC9.22□□□□□ -0.93
COL15A1P39059 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC9.22□□□□□ -0.93
COL15A1P39059 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC9.22□□□□□ -0.93
COL15A1P39059 OR5M6P-201ENST00000530227 937 ntBASIC9.22□□□□□ -0.93
COL15A1P39059 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
COL15A1P39059 HNRNPA1P71-201ENST00000559135 950 ntBASIC9.22□□□□□ -0.93
COL15A1P39059 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
COL15A1P39059 RN7SL667P-201ENST00000582817 298 ntBASIC9.22□□□□□ -0.93
COL15A1P39059 MIR4428-201ENST00000584884 73 ntBASIC9.22□□□□□ -0.93
COL15A1P39059 AC016747.2-203ENST00000606876 289 ntTSL 3 BASIC9.22□□□□□ -0.93
COL15A1P39059 AL596275.2-207ENST00000641188 675 ntBASIC9.22□□□□□ -0.93
COL15A1P39059 ERBB3-221ENST00000553131 3237 ntTSL 2 BASIC9.22□□□□□ -0.93
COL15A1P39059 PTPRT-211ENST00000618610 3230 ntTSL 5 BASIC9.22□□□□□ -0.93
COL15A1P39059 TAF1-204ENST00000423759 7722 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
COL15A1P39059 OLR1-201ENST00000309539 2462 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
COL15A1P39059 MAPK10-279ENST00000641157 2449 ntBASIC9.21□□□□□ -0.93
COL15A1P39059 VRK2-203ENST00000417641 2381 ntAPPRIS ALT2 TSL 2 BASIC9.21□□□□□ -0.93
COL15A1P39059 LRP1-201ENST00000243077 14897 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
COL15A1P39059 SPARC-201ENST00000231061 3701 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
COL15A1P39059 ZNF235-201ENST00000291182 3188 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
COL15A1P39059 OTX2-201ENST00000339475 3001 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
COL15A1P39059 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC9.21□□□□□ -0.93
COL15A1P39059 METTL7A-203ENST00000548553 4076 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.93
COL15A1P39059 MAP3K7CL-201ENST00000286791 1725 ntTSL 5 BASIC9.21□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms