RNA–Protein interactions for RNA: ENST00000401596.1

CNN3P1-201, Transcript of calponin 3 pseudogene 1, humanhuman

BASIC

Gene CNN3P1, Length 935 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3P1-201ENST00000401596 AEBP2Q6ZN18 517 aaPredicted RBP19.37■□□□□ 0.69
CNN3P1-201ENST00000401596 CHIC1Q5VXU3 224 aa18.26■□□□□ 0.51
CNN3P1-201ENST00000401596 NISCHQ9Y2I1 1504 aa16.77■□□□□ 0.28
CNN3P1-201ENST00000401596 SENP3Q9H4L4 574 aaPredicted RBP16.48■□□□□ 0.23
CNN3P1-201ENST00000401596 PHF23Q9BUL5 403 aaPredicted RBP16.29■□□□□ 0.2
CNN3P1-201ENST00000401596 FOXD1Q16676 465 aa15.41■□□□□ 0.06
CNN3P1-201ENST00000401596 ABCC9O60706 1549 aa15.09■□□□□ 0.01
CNN3P1-201ENST00000401596 DNAJC5BQ9UF47 199 aa14.87□□□□□ -0.03
CNN3P1-201ENST00000401596 CCDC180Q9P1Z9 1646 aa14.62□□□□□ -0.07
CNN3P1-201ENST00000401596 PLPPR3Q6T4P5 718 aa14.54□□□□□ -0.08
CNN3P1-201ENST00000401596 MSH5O43196 834 aa14.42□□□□□ -0.1
CNN3P1-201ENST00000401596 PIAS4Q8N2W9 510 aaPredicted RBP14.39□□□□□ -0.11
CNN3P1-201ENST00000401596 PPP6R1Q9UPN7 881 aa14.37□□□□□ -0.11
CNN3P1-201ENST00000401596 ADRA2BP18089 450 aa14.33□□□□□ -0.12
CNN3P1-201ENST00000401596 DNAJC5Q9H3Z4 198 aa14.29□□□□□ -0.12
CNN3P1-201ENST00000401596 POTEDQ86YR6 584 aa14.27□□□□□ -0.13
CNN3P1-201ENST00000401596 ZCCHC6Q5VYS8 1495 aaKnown RBP14.12□□□□□ -0.15
CNN3P1-201ENST00000401596 DCAF1Q9Y4B6 1507 aa13.96□□□□□ -0.17
CNN3P1-201ENST00000401596 RB1CC1Q8TDY2 1594 aa13.95□□□□□ -0.18
CNN3P1-201ENST00000401596 PABPN1Q86U42 306 aaKnown RBP eCLIP13.89□□□□□ -0.19
CNN3P1-201ENST00000401596 MYO15BQ96JP2 1530 aa13.8□□□□□ -0.2
CNN3P1-201ENST00000401596 UNC13AQ9UPW8 1703 aa13.7□□□□□ -0.22
CNN3P1-201ENST00000401596 CECR2Q9BXF3 1484 aa13.67□□□□□ -0.22
CNN3P1-201ENST00000401596 NACADO15069 1562 aa13.61□□□□□ -0.23
CNN3P1-201ENST00000401596 CC2D2AQ9P2K1 1620 aa13.58□□□□□ -0.24
CNN3P1-201ENST00000401596 DCAF8L2P0C7V8 631 aa13.56□□□□□ -0.24
CNN3P1-201ENST00000401596 BICRAQ9NZM4 1560 aa13.55□□□□□ -0.24
CNN3P1-201ENST00000401596 SHROOM4Q9ULL8 1493 aa13.51□□□□□ -0.25
CNN3P1-201ENST00000401596 TRIM41Q8WV44 630 aa13.4□□□□□ -0.26
CNN3P1-201ENST00000401596 CUX2O14529 1486 aa13.32□□□□□ -0.28
CNN3P1-201ENST00000401596 EIF4G1Q04637 1599 aaKnown RBP13.32□□□□□ -0.28
CNN3P1-201ENST00000401596 SCRIBQ14160 1630 aa13.31□□□□□ -0.28
CNN3P1-201ENST00000401596 MAPK8IP2Q13387 824 aaPredicted RBP13.2□□□□□ -0.3
CNN3P1-201ENST00000401596 ERCC6Q03468 1493 aa13.11□□□□□ -0.31
CNN3P1-201ENST00000401596 DMRT2Q9Y5R5 561 aa13.07□□□□□ -0.32
CNN3P1-201ENST00000401596 SUPT5HO00267 1087 aaKnown RBP13.03□□□□□ -0.32
CNN3P1-201ENST00000401596 SCAF1Q9H7N4 1312 aaKnown RBP13.03□□□□□ -0.32
CNN3P1-201ENST00000401596 RSF1Q96T23 1441 aaPredicted RBP13.03□□□□□ -0.32
CNN3P1-201ENST00000401596 MROH2BQ7Z745 1585 aa12.93□□□□□ -0.34
CNN3P1-201ENST00000401596 BAZ1AQ9NRL2 1556 aaPredicted RBP12.93□□□□□ -0.34
CNN3P1-201ENST00000401596 SMARCA4P51532 1647 aa12.86□□□□□ -0.35
CNN3P1-201ENST00000401596 WIZO95785 1651 aa12.8□□□□□ -0.36
CNN3P1-201ENST00000401596 PEG3Q9GZU2 1588 aa12.79□□□□□ -0.36
CNN3P1-201ENST00000401596 PPP4R3CPQ6ZMV5 832 aa12.76□□□□□ -0.37
CNN3P1-201ENST00000401596 THOC2Q8NI27 1593 aaKnown RBP12.75□□□□□ -0.37
CNN3P1-201ENST00000401596 TOP2AP11388 1531 aaKnown RBP12.72□□□□□ -0.37
CNN3P1-201ENST00000401596 NESP48681 1621 aa12.7□□□□□ -0.38
CNN3P1-201ENST00000401596 ATAD2BQ9ULI0 1458 aa12.65□□□□□ -0.38
CNN3P1-201ENST00000401596 SMARCA2P51531 1590 aa12.64□□□□□ -0.39
CNN3P1-201ENST00000401596 DCAF8L1A6NGE4 600 aa12.61□□□□□ -0.39
CNN3P1-201ENST00000401596 CCDC88BA6NC98 1476 aa12.57□□□□□ -0.4
CNN3P1-201ENST00000401596 NCAPD3P42695 1498 aa12.57□□□□□ -0.4
CNN3P1-201ENST00000401596 OSCARQ8IYS5 282 aa12.56□□□□□ -0.4
CNN3P1-201ENST00000401596 KIF21AQ7Z4S6 1674 aa12.56□□□□□ -0.4
CNN3P1-201ENST00000401596 RIMBP3CA6NJZ7 1639 aa12.55□□□□□ -0.4
CNN3P1-201ENST00000401596 RIMBP3BA6NNM3 1639 aa12.55□□□□□ -0.4
CNN3P1-201ENST00000401596 RIMBP3Q9UFD9 1639 aa12.55□□□□□ -0.4
CNN3P1-201ENST00000401596 TRHP20396 242 aaPredicted RBP12.55□□□□□ -0.4
CNN3P1-201ENST00000401596 HMGXB3Q12766 1538 aa12.54□□□□□ -0.4
CNN3P1-201ENST00000401596 HOXD11P31277 338 aaPredicted RBP12.53□□□□□ -0.4
CNN3P1-201ENST00000401596 CNKSR2Q8WXI2 1034 aa12.52□□□□□ -0.41
CNN3P1-201ENST00000401596 BAZ1BQ9UIG0 1483 aaKnown RBP12.52□□□□□ -0.41
CNN3P1-201ENST00000401596 CACNB1Q02641 598 aaPredicted RBP12.48□□□□□ -0.41
CNN3P1-201ENST00000401596 LAMC3Q9Y6N6 1575 aa12.44□□□□□ -0.42
CNN3P1-201ENST00000401596 ILDR1Q86SU0 546 aaPredicted RBP12.44□□□□□ -0.42
CNN3P1-201ENST00000401596 RNF216Q9NWF9 866 aaPredicted RBP12.41□□□□□ -0.42
CNN3P1-201ENST00000401596 ARHGEF11O15085 1522 aa12.4□□□□□ -0.42
CNN3P1-201ENST00000401596 PDS5BQ9NTI5 1447 aa12.39□□□□□ -0.43
CNN3P1-201ENST00000401596 CYB5RLQ6IPT4 315 aa12.37□□□□□ -0.43
CNN3P1-201ENST00000401596 MRC2Q9UBG0 1479 aa12.36□□□□□ -0.43
CNN3P1-201ENST00000401596 WDR62O43379 1518 aa12.35□□□□□ -0.43
CNN3P1-201ENST00000401596 RNF39Q9H2S5 420 aa12.31□□□□□ -0.44
CNN3P1-201ENST00000401596 CFTRP13569 1480 aa12.28□□□□□ -0.44
CNN3P1-201ENST00000401596 ABCC8Q09428 1581 aa12.26□□□□□ -0.45
CNN3P1-201ENST00000401596 WRNQ14191 1432 aaPredicted RBP eCLIP12.22□□□□□ -0.45
CNN3P1-201ENST00000401596 KCNA4P22459 653 aa12.22□□□□□ -0.45
CNN3P1-201ENST00000401596 NCBP3Q53F19 620 aaKnown RBP12.21□□□□□ -0.45
CNN3P1-201ENST00000401596 ARAP1Q96P48 1450 aa12.21□□□□□ -0.46
CNN3P1-201ENST00000401596 PRDM2Q13029 1718 aa12.2□□□□□ -0.46
CNN3P1-201ENST00000401596 CADPSQ9ULU8 1353 aa12.19□□□□□ -0.46
CNN3P1-201ENST00000401596 SYNJ1O43426 1573 aa12.18□□□□□ -0.46
CNN3P1-201ENST00000401596 TOP2BQ02880 1626 aa12.15□□□□□ -0.46
CNN3P1-201ENST00000401596 BIVM-ERCC5R4GMW8 1640 aa12.15□□□□□ -0.46
CNN3P1-201ENST00000401596 CEP164Q9UPV0 1460 aa12.14□□□□□ -0.47
CNN3P1-201ENST00000401596 EEA1Q15075 1411 aa12.13□□□□□ -0.47
CNN3P1-201ENST00000401596 C1QBPQ07021 282 aaKnown RBP12.1□□□□□ -0.47
CNN3P1-201ENST00000401596 LOC105371045A0A1W2PR82 267 aa12.09□□□□□ -0.47
CNN3P1-201ENST00000401596 CUX1P39880 1505 aa12.08□□□□□ -0.48
CNN3P1-201ENST00000401596 NPM3O75607 178 aaKnown RBP12.07□□□□□ -0.48
CNN3P1-201ENST00000401596 SOGA1O94964 1423 aa12.07□□□□□ -0.48
CNN3P1-201ENST00000401596 CHD1O14646 1710 aa12.04□□□□□ -0.48
CNN3P1-201ENST00000401596 FANCD2Q9BXW9 1451 aa12.03□□□□□ -0.48
CNN3P1-201ENST00000401596 RUSC2Q8N2Y8 1516 aa12.03□□□□□ -0.48
CNN3P1-201ENST00000401596 CSRNP3Q8WYN3 585 aa12□□□□□ -0.49
CNN3P1-201ENST00000401596 ZNF608Q9ULD9 1512 aaPredicted RBP12□□□□□ -0.49
CNN3P1-201ENST00000401596 FAM9AQ8IZU1 332 aaPredicted RBP11.99□□□□□ -0.49
CNN3P1-201ENST00000401596 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.99□□□□□ -0.49
CNN3P1-201ENST00000401596 URB2Q14146 1524 aaKnown RBP11.99□□□□□ -0.49
CNN3P1-201ENST00000401596 KIF21BO75037 1637 aa11.97□□□□□ -0.49
CNN3P1-201ENST00000401596 DNMBPQ6XZF7 1577 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms