RNA–Protein interactions for RNA: ENST00000637353.1

EFHC1-233, Transcript of EF-hand domain containing 1, humanhuman

TSL 5 BASIC

Gene EFHC1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFHC1-233ENST00000637353 NISCHQ9Y2I1 1504 aa16.6■□□□□ 0.25
EFHC1-233ENST00000637353 CCDC180Q9P1Z9 1646 aa14.64□□□□□ -0.07
EFHC1-233ENST00000637353 ABCC9O60706 1549 aa14.15□□□□□ -0.14
EFHC1-233ENST00000637353 SHROOM4Q9ULL8 1493 aa14.02□□□□□ -0.17
EFHC1-233ENST00000637353 DCAF8L2P0C7V8 631 aa14.01□□□□□ -0.17
EFHC1-233ENST00000637353 ZCCHC6Q5VYS8 1495 aaKnown RBP13.85□□□□□ -0.19
EFHC1-233ENST00000637353 SUPT5HO00267 1087 aaKnown RBP13.83□□□□□ -0.19
EFHC1-233ENST00000637353 NACADO15069 1562 aa13.78□□□□□ -0.2
EFHC1-233ENST00000637353 DCAF1Q9Y4B6 1507 aa13.76□□□□□ -0.21
EFHC1-233ENST00000637353 RB1CC1Q8TDY2 1594 aa13.75□□□□□ -0.21
EFHC1-233ENST00000637353 MYO15BQ96JP2 1530 aa13.75□□□□□ -0.21
EFHC1-233ENST00000637353 PCGF6Q9BYE7 350 aa13.38□□□□□ -0.27
EFHC1-233ENST00000637353 SCRIBQ14160 1630 aa13.37□□□□□ -0.27
EFHC1-233ENST00000637353 PPARGC1BQ86YN6 1023 aaKnown RBP13.37□□□□□ -0.27
EFHC1-233ENST00000637353 PABPN1Q86U42 306 aaKnown RBP eCLIP13.29□□□□□ -0.28
EFHC1-233ENST00000637353 EHMT2Q96KQ7 1210 aa13.23□□□□□ -0.29
EFHC1-233ENST00000637353 UNC13AQ9UPW8 1703 aa13.17□□□□□ -0.3
EFHC1-233ENST00000637353 HRCP23327 699 aa13.15□□□□□ -0.3
EFHC1-233ENST00000637353 BICRAQ9NZM4 1560 aa13.14□□□□□ -0.31
EFHC1-233ENST00000637353 LOC105371045A0A1W2PR82 267 aa13.13□□□□□ -0.31
EFHC1-233ENST00000637353 CHIC1Q5VXU3 224 aa13.1□□□□□ -0.31
EFHC1-233ENST00000637353 FAM9AQ8IZU1 332 aaPredicted RBP12.95□□□□□ -0.34
EFHC1-233ENST00000637353 BAZ1AQ9NRL2 1556 aaPredicted RBP12.91□□□□□ -0.34
EFHC1-233ENST00000637353 EIF4G1Q04637 1599 aaKnown RBP12.87□□□□□ -0.35
EFHC1-233ENST00000637353 CECR2Q9BXF3 1484 aa12.85□□□□□ -0.35
EFHC1-233ENST00000637353 SMARCA4P51532 1647 aa12.8□□□□□ -0.36
EFHC1-233ENST00000637353 TTBK1Q5TCY1 1321 aaPredicted RBP12.78□□□□□ -0.36
EFHC1-233ENST00000637353 SMARCA2P51531 1590 aa12.78□□□□□ -0.36
EFHC1-233ENST00000637353 MROH2BQ7Z745 1585 aa12.75□□□□□ -0.37
EFHC1-233ENST00000637353 CC2D2AQ9P2K1 1620 aa12.74□□□□□ -0.37
EFHC1-233ENST00000637353 RSF1Q96T23 1441 aaPredicted RBP12.74□□□□□ -0.37
EFHC1-233ENST00000637353 ATAD2BQ9ULI0 1458 aa12.72□□□□□ -0.37
EFHC1-233ENST00000637353 NCAPD3P42695 1498 aa12.7□□□□□ -0.38
EFHC1-233ENST00000637353 BAZ1BQ9UIG0 1483 aaKnown RBP12.7□□□□□ -0.38
EFHC1-233ENST00000637353 DNAJC5BQ9UF47 199 aa12.66□□□□□ -0.38
EFHC1-233ENST00000637353 PEG3Q9GZU2 1588 aa12.65□□□□□ -0.38
EFHC1-233ENST00000637353 HMGXB3Q12766 1538 aa12.64□□□□□ -0.39
EFHC1-233ENST00000637353 TRIM41Q8WV44 630 aa12.62□□□□□ -0.39
EFHC1-233ENST00000637353 TRIM26Q12899 539 aaPredicted RBP12.61□□□□□ -0.39
EFHC1-233ENST00000637353 WIZO95785 1651 aa12.59□□□□□ -0.39
EFHC1-233ENST00000637353 TOP2AP11388 1531 aaKnown RBP12.56□□□□□ -0.4
EFHC1-233ENST00000637353 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.5□□□□□ -0.41
EFHC1-233ENST00000637353 SCAF1Q9H7N4 1312 aaKnown RBP12.49□□□□□ -0.41
EFHC1-233ENST00000637353 CCDC88BA6NC98 1476 aa12.4□□□□□ -0.42
EFHC1-233ENST00000637353 CCER1Q8TC90 406 aaPredicted RBP12.39□□□□□ -0.43
EFHC1-233ENST00000637353 CADPSQ9ULU8 1353 aa12.39□□□□□ -0.43
EFHC1-233ENST00000637353 YTHDC1Q96MU7 727 aaKnown RBP12.37□□□□□ -0.43
EFHC1-233ENST00000637353 PDS5BQ9NTI5 1447 aa12.35□□□□□ -0.43
EFHC1-233ENST00000637353 LAMC3Q9Y6N6 1575 aa12.32□□□□□ -0.44
EFHC1-233ENST00000637353 CFTRP13569 1480 aa12.3□□□□□ -0.44
EFHC1-233ENST00000637353 ERCC6Q03468 1493 aa12.3□□□□□ -0.44
EFHC1-233ENST00000637353 RANGAP1P46060 587 aaPredicted RBP12.29□□□□□ -0.44
EFHC1-233ENST00000637353 NEUROD1Q13562 356 aa12.28□□□□□ -0.44
EFHC1-233ENST00000637353 ZEB1P37275 1124 aaPredicted RBP12.26□□□□□ -0.45
EFHC1-233ENST00000637353 GTF3C3Q9Y5Q9 886 aa12.24□□□□□ -0.45
EFHC1-233ENST00000637353 NESP48681 1621 aa12.23□□□□□ -0.45
EFHC1-233ENST00000637353 FANCD2Q9BXW9 1451 aa12.22□□□□□ -0.45
EFHC1-233ENST00000637353 CEP164Q9UPV0 1460 aa12.21□□□□□ -0.45
EFHC1-233ENST00000637353 DIEXFQ68CQ4 756 aaKnown RBP12.17□□□□□ -0.46
EFHC1-233ENST00000637353 ABCC8Q09428 1581 aa12.16□□□□□ -0.46
EFHC1-233ENST00000637353 UBTFP17480 764 aaKnown RBP12.14□□□□□ -0.47
EFHC1-233ENST00000637353 ACIN1Q9UKV3 1341 aaKnown RBP12.13□□□□□ -0.47
EFHC1-233ENST00000637353 MRC2Q9UBG0 1479 aa12.13□□□□□ -0.47
EFHC1-233ENST00000637353 PRDM2Q13029 1718 aa12.12□□□□□ -0.47
EFHC1-233ENST00000637353 HNRNPUL2Q1KMD3 747 aaKnown RBP12.11□□□□□ -0.47
EFHC1-233ENST00000637353 WRNQ14191 1432 aaPredicted RBP eCLIP12.09□□□□□ -0.47
EFHC1-233ENST00000637353 PELP1Q8IZL8 1130 aaKnown RBP12.08□□□□□ -0.48
EFHC1-233ENST00000637353 KIF21AQ7Z4S6 1674 aa12.05□□□□□ -0.48
EFHC1-233ENST00000637353 CENPBP07199 599 aaPredicted RBP12.03□□□□□ -0.48
EFHC1-233ENST00000637353 DNMBPQ6XZF7 1577 aa12.03□□□□□ -0.48
EFHC1-233ENST00000637353 CUX2O14529 1486 aa12.02□□□□□ -0.49
EFHC1-233ENST00000637353 TOPBP1Q92547 1522 aa12.01□□□□□ -0.49
EFHC1-233ENST00000637353 WDR62O43379 1518 aa11.99□□□□□ -0.49
EFHC1-233ENST00000637353 URB2Q14146 1524 aaKnown RBP11.99□□□□□ -0.49
EFHC1-233ENST00000637353 SOGA1O94964 1423 aa11.97□□□□□ -0.49
EFHC1-233ENST00000637353 THOC2Q8NI27 1593 aaKnown RBP11.96□□□□□ -0.49
EFHC1-233ENST00000637353 CUX1P39880 1505 aa11.95□□□□□ -0.5
EFHC1-233ENST00000637353 IFT140Q96RY7 1462 aa11.95□□□□□ -0.5
EFHC1-233ENST00000637353 FGD5Q6ZNL6 1462 aa11.94□□□□□ -0.5
EFHC1-233ENST00000637353 TOP2BQ02880 1626 aa11.94□□□□□ -0.5
EFHC1-233ENST00000637353 MIER1Q8N108 512 aa11.93□□□□□ -0.5
EFHC1-233ENST00000637353 CSRNP3Q8WYN3 585 aa11.92□□□□□ -0.5
EFHC1-233ENST00000637353 RUSC2Q8N2Y8 1516 aa11.92□□□□□ -0.5
EFHC1-233ENST00000637353 POLA1P09884 1462 aaPredicted RBP11.92□□□□□ -0.5
EFHC1-233ENST00000637353 BIVM-ERCC5R4GMW8 1640 aa11.9□□□□□ -0.5
EFHC1-233ENST00000637353 SYNJ1O43426 1573 aa11.89□□□□□ -0.51
EFHC1-233ENST00000637353 KIF27Q86VH2 1401 aa11.88□□□□□ -0.51
EFHC1-233ENST00000637353 ZNF316A6NFI3 1004 aaPredicted RBP11.86□□□□□ -0.51
EFHC1-233ENST00000637353 ITGAEP38570 1179 aa11.85□□□□□ -0.51
EFHC1-233ENST00000637353 RAD54L2Q9Y4B4 1467 aa11.85□□□□□ -0.51
EFHC1-233ENST00000637353 EEA1Q15075 1411 aa11.84□□□□□ -0.51
EFHC1-233ENST00000637353 ABCA10Q8WWZ4 1543 aa11.84□□□□□ -0.51
EFHC1-233ENST00000637353 TDRD9Q8NDG6 1382 aaKnown RBP11.83□□□□□ -0.52
EFHC1-233ENST00000637353 WDR97A6NE52 1622 aa11.82□□□□□ -0.52
EFHC1-233ENST00000637353 CEP162Q5TB80 1403 aa11.81□□□□□ -0.52
EFHC1-233ENST00000637353 GAPVD1Q14C86 1478 aa11.8□□□□□ -0.52
EFHC1-233ENST00000637353 APLP2Q06481 763 aa11.8□□□□□ -0.52
EFHC1-233ENST00000637353 BCANQ96GW7 911 aa11.79□□□□□ -0.52
EFHC1-233ENST00000637353 GRIN2BQ13224 1484 aa11.79□□□□□ -0.52
EFHC1-233ENST00000637353 AQRO60306 1485 aaKnown RBP eCLIP11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms