RNA–Protein interactions for RNA: ENST00000618610.1

PTPRT-211, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

TSL 5 BASIC

Gene PTPRT, Length 3,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-211ENST00000618610 NISCHQ9Y2I1 1504 aa15.48■□□□□ 0.07
PTPRT-211ENST00000618610 SHROOM4Q9ULL8 1493 aa14.23□□□□□ -0.13
PTPRT-211ENST00000618610 DCAF8L2P0C7V8 631 aa14.17□□□□□ -0.14
PTPRT-211ENST00000618610 HRCP23327 699 aa13.94□□□□□ -0.18
PTPRT-211ENST00000618610 PPARGC1BQ86YN6 1023 aaKnown RBP13.93□□□□□ -0.18
PTPRT-211ENST00000618610 SUPT5HO00267 1087 aaKnown RBP13.88□□□□□ -0.19
PTPRT-211ENST00000618610 CCDC180Q9P1Z9 1646 aa13.79□□□□□ -0.2
PTPRT-211ENST00000618610 PELP1Q8IZL8 1130 aaKnown RBP13.71□□□□□ -0.22
PTPRT-211ENST00000618610 PCGF6Q9BYE7 350 aa13.7□□□□□ -0.22
PTPRT-211ENST00000618610 SCAF1Q9H7N4 1312 aaKnown RBP13.47□□□□□ -0.25
PTPRT-211ENST00000618610 EHMT2Q96KQ7 1210 aa13.47□□□□□ -0.25
PTPRT-211ENST00000618610 CHIC1Q5VXU3 224 aa13.39□□□□□ -0.27
PTPRT-211ENST00000618610 MYO15BQ96JP2 1530 aa13.28□□□□□ -0.28
PTPRT-211ENST00000618610 MYT1Q01538 1121 aa13.17□□□□□ -0.3
PTPRT-211ENST00000618610 ABCC9O60706 1549 aa13.14□□□□□ -0.31
PTPRT-211ENST00000618610 ZCCHC6Q5VYS8 1495 aaKnown RBP13.07□□□□□ -0.32
PTPRT-211ENST00000618610 FAM9AQ8IZU1 332 aaPredicted RBP13.05□□□□□ -0.32
PTPRT-211ENST00000618610 LOC105371045A0A1W2PR82 267 aa13.04□□□□□ -0.32
PTPRT-211ENST00000618610 NEUROD1Q13562 356 aa13.01□□□□□ -0.33
PTPRT-211ENST00000618610 AEBP2Q6ZN18 517 aaPredicted RBP13□□□□□ -0.33
PTPRT-211ENST00000618610 GTF3C3Q9Y5Q9 886 aa12.98□□□□□ -0.33
PTPRT-211ENST00000618610 ACIN1Q9UKV3 1341 aaKnown RBP12.96□□□□□ -0.34
PTPRT-211ENST00000618610 TRIM26Q12899 539 aaPredicted RBP12.95□□□□□ -0.34
PTPRT-211ENST00000618610 TTBK1Q5TCY1 1321 aaPredicted RBP12.87□□□□□ -0.35
PTPRT-211ENST00000618610 NACADO15069 1562 aa12.84□□□□□ -0.35
PTPRT-211ENST00000618610 DCAF1Q9Y4B6 1507 aa12.82□□□□□ -0.36
PTPRT-211ENST00000618610 ZEB1P37275 1124 aaPredicted RBP12.82□□□□□ -0.36
PTPRT-211ENST00000618610 RB1CC1Q8TDY2 1594 aa12.81□□□□□ -0.36
PTPRT-211ENST00000618610 UNC13AQ9UPW8 1703 aa12.74□□□□□ -0.37
PTPRT-211ENST00000618610 CENPBP07199 599 aaPredicted RBP12.71□□□□□ -0.37
PTPRT-211ENST00000618610 YTHDC1Q96MU7 727 aaKnown RBP12.69□□□□□ -0.38
PTPRT-211ENST00000618610 PABPN1Q86U42 306 aaKnown RBP eCLIP12.66□□□□□ -0.38
PTPRT-211ENST00000618610 BCL11AQ9H165 835 aa12.65□□□□□ -0.38
PTPRT-211ENST00000618610 DIEXFQ68CQ4 756 aaKnown RBP12.62□□□□□ -0.39
PTPRT-211ENST00000618610 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.6□□□□□ -0.39
PTPRT-211ENST00000618610 RANGAP1P46060 587 aaPredicted RBP12.6□□□□□ -0.39
PTPRT-211ENST00000618610 SCRIBQ14160 1630 aa12.6□□□□□ -0.39
PTPRT-211ENST00000618610 TRIM41Q8WV44 630 aa12.55□□□□□ -0.4
PTPRT-211ENST00000618610 BICRAQ9NZM4 1560 aa12.55□□□□□ -0.4
PTPRT-211ENST00000618610 CCER1Q8TC90 406 aaPredicted RBP12.52□□□□□ -0.41
PTPRT-211ENST00000618610 CECR2Q9BXF3 1484 aa12.4□□□□□ -0.43
PTPRT-211ENST00000618610 RSF1Q96T23 1441 aaPredicted RBP12.39□□□□□ -0.43
PTPRT-211ENST00000618610 CSRNP3Q8WYN3 585 aa12.38□□□□□ -0.43
PTPRT-211ENST00000618610 ANP32EQ9BTT0 268 aa12.36□□□□□ -0.43
PTPRT-211ENST00000618610 PRKCSHP14314 528 aaPredicted RBP12.36□□□□□ -0.43
PTPRT-211ENST00000618610 MIER1Q8N108 512 aa12.32□□□□□ -0.44
PTPRT-211ENST00000618610 TSHZ2Q9NRE2 1034 aa12.24□□□□□ -0.45
PTPRT-211ENST00000618610 ZNF316A6NFI3 1004 aaPredicted RBP12.22□□□□□ -0.45
PTPRT-211ENST00000618610 SUPT16HQ9Y5B9 1047 aaKnown RBP12.2□□□□□ -0.46
PTPRT-211ENST00000618610 PHF23Q9BUL5 403 aaPredicted RBP12.18□□□□□ -0.46
PTPRT-211ENST00000618610 BCANQ96GW7 911 aa12.15□□□□□ -0.46
PTPRT-211ENST00000618610 MROH2BQ7Z745 1585 aa12.14□□□□□ -0.47
PTPRT-211ENST00000618610 EIF4G1Q04637 1599 aaKnown RBP12.11□□□□□ -0.47
PTPRT-211ENST00000618610 UBTFP17480 764 aaKnown RBP12.11□□□□□ -0.47
PTPRT-211ENST00000618610 WIZO95785 1651 aa12.08□□□□□ -0.48
PTPRT-211ENST00000618610 DNAJC5BQ9UF47 199 aa12.07□□□□□ -0.48
PTPRT-211ENST00000618610 SLC24A1O60721 1099 aa12.06□□□□□ -0.48
PTPRT-211ENST00000618610 CC2D2AQ9P2K1 1620 aa12.05□□□□□ -0.48
PTPRT-211ENST00000618610 ABCC8Q09428 1581 aa12.02□□□□□ -0.48
PTPRT-211ENST00000618610 HNRNPUL2Q1KMD3 747 aaKnown RBP11.99□□□□□ -0.49
PTPRT-211ENST00000618610 RUSC2Q8N2Y8 1516 aa11.95□□□□□ -0.5
PTPRT-211ENST00000618610 SMARCA4P51532 1647 aa11.94□□□□□ -0.5
PTPRT-211ENST00000618610 ANO8Q9HCE9 1232 aaPredicted RBP11.94□□□□□ -0.5
PTPRT-211ENST00000618610 PEG3Q9GZU2 1588 aa11.93□□□□□ -0.5
PTPRT-211ENST00000618610 ITGAEP38570 1179 aa11.93□□□□□ -0.5
PTPRT-211ENST00000618610 RBM19Q9Y4C8 960 aaKnown RBP11.93□□□□□ -0.5
PTPRT-211ENST00000618610 SOGA1O94964 1423 aa11.92□□□□□ -0.5
PTPRT-211ENST00000618610 FKBP8Q14318 412 aa11.9□□□□□ -0.5
PTPRT-211ENST00000618610 CCDC88BA6NC98 1476 aa11.9□□□□□ -0.5
PTPRT-211ENST00000618610 MSH5O43196 834 aa11.89□□□□□ -0.51
PTPRT-211ENST00000618610 ATP1B4Q9UN42 357 aaPredicted RBP11.88□□□□□ -0.51
PTPRT-211ENST00000618610 KCNH8Q96L42 1107 aa11.88□□□□□ -0.51
PTPRT-211ENST00000618610 BAZ1AQ9NRL2 1556 aaPredicted RBP11.88□□□□□ -0.51
PTPRT-211ENST00000618610 CEP162Q5TB80 1403 aa11.86□□□□□ -0.51
PTPRT-211ENST00000618610 P3H3Q8IVL6 736 aa11.84□□□□□ -0.51
PTPRT-211ENST00000618610 ERICH6Q7L0X2 663 aa11.83□□□□□ -0.52
PTPRT-211ENST00000618610 HMGXB3Q12766 1538 aa11.83□□□□□ -0.52
PTPRT-211ENST00000618610 CCDC136Q96JN2 1154 aa11.82□□□□□ -0.52
PTPRT-211ENST00000618610 CLSPNQ9HAW4 1339 aa11.82□□□□□ -0.52
PTPRT-211ENST00000618610 NCAPD3P42695 1498 aa11.81□□□□□ -0.52
PTPRT-211ENST00000618610 SMARCA2P51531 1590 aa11.79□□□□□ -0.52
PTPRT-211ENST00000618610 ATAD2BQ9ULI0 1458 aa11.79□□□□□ -0.52
PTPRT-211ENST00000618610 APLP2Q06481 763 aa11.79□□□□□ -0.52
PTPRT-211ENST00000618610 ARID3CA6NKF2 412 aa11.79□□□□□ -0.52
PTPRT-211ENST00000618610 TNIKQ9UKE5 1360 aa11.77□□□□□ -0.53
PTPRT-211ENST00000618610 TOP2AP11388 1531 aaKnown RBP11.77□□□□□ -0.53
PTPRT-211ENST00000618610 SALL2Q9Y467 1007 aaPredicted RBP11.77□□□□□ -0.53
PTPRT-211ENST00000618610 DEKP35659 375 aaKnown RBP11.76□□□□□ -0.53
PTPRT-211ENST00000618610 WRNQ14191 1432 aaPredicted RBP eCLIP11.73□□□□□ -0.53
PTPRT-211ENST00000618610 PLPPR3Q6T4P5 718 aa11.71□□□□□ -0.53
PTPRT-211ENST00000618610 RTN4Q9NQC3 1192 aaKnown RBP11.69□□□□□ -0.54
PTPRT-211ENST00000618610 NEFLP07196 543 aa11.69□□□□□ -0.54
PTPRT-211ENST00000618610 NBR1Q14596 966 aa11.69□□□□□ -0.54
PTPRT-211ENST00000618610 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.69□□□□□ -0.54
PTPRT-211ENST00000618610 GOLGA3Q08378 1498 aa11.68□□□□□ -0.54
PTPRT-211ENST00000618610 EEA1Q15075 1411 aa11.68□□□□□ -0.54
PTPRT-211ENST00000618610 IRX6P78412 446 aaPredicted RBP11.67□□□□□ -0.54
PTPRT-211ENST00000618610 TRIM52Q96A61 297 aa11.67□□□□□ -0.54
PTPRT-211ENST00000618610 CLIP1P30622 1438 aa11.64□□□□□ -0.55
PTPRT-211ENST00000618610 BAZ1BQ9UIG0 1483 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms